Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | KXY09_RS00555 | Genome accession | NZ_CP079719 |
| Coordinates | 99307..101745 (+) | Length | 812 a.a. |
| NCBI ID | WP_132107346.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain LABIM44 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 94307..106745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KXY09_RS00540 (KXY09_00540) | ctsR | 97184..97648 (+) | 465 | WP_003156396.1 | transcriptional regulator CtsR | - |
| KXY09_RS00545 (KXY09_00545) | - | 97662..98219 (+) | 558 | WP_007410387.1 | UvrB/UvrC motif-containing protein | - |
| KXY09_RS00550 (KXY09_00550) | - | 98219..99310 (+) | 1092 | WP_003156398.1 | protein arginine kinase | - |
| KXY09_RS00555 (KXY09_00555) | clpC | 99307..101745 (+) | 2439 | WP_132107346.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| KXY09_RS00560 (KXY09_00560) | - | 101996..102232 (+) | 237 | WP_052826974.1 | mersacidin/lichenicidin family type 2 lantibiotic | - |
| KXY09_RS00565 (KXY09_00565) | lanM | 102289..103836 (+) | 1548 | WP_219152030.1 | type 2 lanthipeptide synthetase LanM | - |
| KXY09_RS00570 (KXY09_00570) | lanM | 103853..105238 (+) | 1386 | Protein_89 | type 2 lanthipeptide synthetase LanM | - |
Sequence
Protein
Download Length: 812 a.a. Molecular weight: 90249.64 Da Isoelectric Point: 5.7558
>NTDB_id=588872 KXY09_RS00555 WP_132107346.1 99307..101745(+) (clpC) [Bacillus velezensis strain LABIM44]
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQVINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTDA
MMFGRFTERAQKVLALAQEEALRLGHTNIGTEHILLGLVREGEGIAFKALEALGLNSDKMQKEVESLIGRGQESTTSVPH
YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQVINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMV
VSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRVDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
TDIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDG
EFVVKTTAKTDA
Nucleotide
Download Length: 2439 bp
>NTDB_id=588872 KXY09_RS00555 WP_132107346.1 99307..101745(+) (clpC) [Bacillus velezensis strain LABIM44]
ATGATGTTTGGAAGGTTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATACTATTAGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTTAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATCGGTCGAGGGCAGGAGAGCACCACCTCTGTTCCTCAT
TACACACCTCGAGCCAAAAAGGTAATAGAGTTATCAATGGATGAAGCTAGAAAGCTAGGACATTCTTATGTGGGAACAGA
ACACATACTTCTCGGACTGATTCGTGAAGGAGAAGGCGTAGCGGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTGAATA
AGGCGAGACAGCAAGTGCTGCAGCTTCTGGGAAGCAATGAGACGGGATCTTCTGCATCCGGTACGAACAGCAATGCAAAC
ACGCCGACGCTGGACAGTCTGGCGCGTGATTTAACTGCGATTGCGAAGGAAGACAGTCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACGAAGAATAACCCCGTTCTTATCGGAGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGCCTCGCACAGCAGGTCATCAATAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA
ATGACATTAGACATGGGTACGGTTGTAGCCGGTACGAAATACCGCGGAGAATTTGAAGACCGCTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCCGGCAATATTATTTTATTCATTGACGAACTGCATACACTGATTGGAGCGGGGGGAGCAGAAGGTG
CGATTGACGCGTCGAATATCTTAAAACCTTCACTGGCCCGCGGAGAGCTCCAATGCATCGGTGCGACAACGCTTGATGAA
TACCGTAAATATATCGAAAAAGACGCCGCTCTCGAGCGCCGTTTCCAGCCGATTCAGGTCGATCAGCCCTCAGCCGATGA
AAGCATTCAAATTTTAAAAGGACTCCGTGACCGCTATGAGGCGCATCACCGCGTATCCATTACCGATGAAGCGATTGAAG
CGGCGGTAAAATTGTCCGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGATGAAGCCGGT
TCAAAAGTGCGTCTCCGTTCGTTCACAACACCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAGAGCCAGGAGTTTGAAAAAGCGGCTTCCCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG
TGGAAGACACGAAAAAAACATGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCGATGGTT
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCCCAAACGGAAACAGATAAGCTTCTCAATATGGAAAACATTCT
GCACTCCCGCGTCATCGGCCAGGATGAAGCTGTTGTAGCTGTTGCAAAGGCTGTCAGACGTGCAAGAGCCGGTCTGAAGG
ACCCGAAACGCCCGATTGGTTCATTCATCTTCCTAGGCCCTACAGGCGTTGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACACTCAACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCACCCTGATGTGTTTAACATACTCCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAAGGACGCACTGTGGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACACCTT
ACAGACATCGTGTCGCTAATGTCTGATCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATCGAGCTGACGGATGC
TGCAAAAGCGAAAGTGGCAGAAGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAACTCCTCAGAGGCAATATTGATAAAGGCCAGCACATTGTTCTTGATGTTGAGGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGGATGCTTAA
ATGATGTTTGGAAGGTTTACAGAGCGAGCTCAAAAGGTATTGGCACTGGCACAGGAAGAAGCACTGCGCTTAGGCCATAC
AAATATCGGAACTGAACATATACTATTAGGGTTAGTCCGTGAAGGTGAAGGGATAGCATTTAAAGCTTTAGAAGCGCTTG
GCCTTAATTCAGATAAAATGCAGAAAGAAGTGGAAAGTTTGATCGGTCGAGGGCAGGAGAGCACCACCTCTGTTCCTCAT
TACACACCTCGAGCCAAAAAGGTAATAGAGTTATCAATGGATGAAGCTAGAAAGCTAGGACATTCTTATGTGGGAACAGA
ACACATACTTCTCGGACTGATTCGTGAAGGAGAAGGCGTAGCGGCGAGAGTTCTGAATAATCTCGGTGTCAGCTTGAATA
AGGCGAGACAGCAAGTGCTGCAGCTTCTGGGAAGCAATGAGACGGGATCTTCTGCATCCGGTACGAACAGCAATGCAAAC
ACGCCGACGCTGGACAGTCTGGCGCGTGATTTAACTGCGATTGCGAAGGAAGACAGTCTTGATCCGGTTATCGGCCGAAG
CAAAGAAATTCAGCGTGTTATTGAGGTATTAAGCCGCAGAACGAAGAATAACCCCGTTCTTATCGGAGAACCGGGTGTAG
GTAAAACTGCGATTGCTGAAGGCCTCGCACAGCAGGTCATCAATAATGAAGTGCCGGAAATTTTACGTGATAAACGCGTA
ATGACATTAGACATGGGTACGGTTGTAGCCGGTACGAAATACCGCGGAGAATTTGAAGACCGCTTGAAAAAAGTAATGGA
TGAAATACGTCAGGCCGGCAATATTATTTTATTCATTGACGAACTGCATACACTGATTGGAGCGGGGGGAGCAGAAGGTG
CGATTGACGCGTCGAATATCTTAAAACCTTCACTGGCCCGCGGAGAGCTCCAATGCATCGGTGCGACAACGCTTGATGAA
TACCGTAAATATATCGAAAAAGACGCCGCTCTCGAGCGCCGTTTCCAGCCGATTCAGGTCGATCAGCCCTCAGCCGATGA
AAGCATTCAAATTTTAAAAGGACTCCGTGACCGCTATGAGGCGCATCACCGCGTATCCATTACCGATGAAGCGATTGAAG
CGGCGGTAAAATTGTCCGACCGTTATATTTCTGACCGCTTCCTTCCGGATAAAGCGATCGATTTAATTGATGAAGCCGGT
TCAAAAGTGCGTCTCCGTTCGTTCACAACACCTCCGAACTTAAAAGAGCTTGAGCAGAAACTCGATGAAGTTCGCAAGGA
AAAAGACGCTGCCGTTCAGAGCCAGGAGTTTGAAAAAGCGGCTTCCCTTCGTGATACGGAGCAGCGCCTGAGAGAACAGG
TGGAAGACACGAAAAAAACATGGAAAGAAAAACAAGGCCAGGAGAACTCCGAAGTTTCTGTAGAGGATATCGCGATGGTT
GTATCCAGCTGGACCGGGGTGCCTGTATCTAAAATTGCCCAAACGGAAACAGATAAGCTTCTCAATATGGAAAACATTCT
GCACTCCCGCGTCATCGGCCAGGATGAAGCTGTTGTAGCTGTTGCAAAGGCTGTCAGACGTGCAAGAGCCGGTCTGAAGG
ACCCGAAACGCCCGATTGGTTCATTCATCTTCCTAGGCCCTACAGGCGTTGGGAAGACAGAGCTGGCAAGAGCGCTGGCG
GAATCCATTTTCGGTGATGAGGAAGCGATGATCAGAGTGGATATGTCCGAATACATGGAGAAACACTCAACTTCACGTCT
TGTCGGTTCTCCTCCGGGATATGTCGGCTATGATGAAGGCGGCCAGCTGACAGAAAAAGTGAGAAGAAAACCTTACTCTG
TCGTACTGCTTGATGAAATTGAAAAAGCGCACCCTGATGTGTTTAACATACTCCTGCAAGTGCTTGAAGACGGACGCTTG
ACTGATTCAAAAGGACGCACTGTGGATTTCCGCAACACGATCCTGATTATGACGTCAAACGTCGGAGCGAGCGAGCTGAA
ACGCAACAAATATGTGGGCTTCAATGTGCAGGATGAATCACAAAACCATAAAGACATGAAAGACAAAGTCATGGGAGAGC
TGAAGCGTGCCTTCAGACCTGAGTTTATCAACCGGATTGACGAAATTATCGTCTTCCACTCCCTTGAGAAAAAACACCTT
ACAGACATCGTGTCGCTAATGTCTGATCAGTTAACAAAACGTCTGAAAGAACAAGATCTCTCTATCGAGCTGACGGATGC
TGCAAAAGCGAAAGTGGCAGAAGAGGGCGTCGATTTGGAATACGGCGCACGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAGGACCGGTTATCAGAAGAACTCCTCAGAGGCAATATTGATAAAGGCCAGCACATTGTTCTTGATGTTGAGGACGGC
GAATTTGTCGTAAAAACAACTGCTAAAACGGATGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.794 |
99.877 |
0.967 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.563 |
98.645 |
0.489 |
| clpC | Streptococcus thermophilus LMD-9 |
46.117 |
100 |
0.468 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.874 |
100 |
0.466 |
| clpC | Streptococcus pneumoniae Rx1 |
45.018 |
100 |
0.451 |
| clpC | Streptococcus pneumoniae D39 |
45.018 |
100 |
0.451 |
| clpC | Streptococcus mutans UA159 |
44.082 |
100 |
0.45 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.772 |
100 |
0.448 |
| clpE | Streptococcus mutans UA159 |
52.995 |
80.172 |
0.425 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.564 |
84.729 |
0.42 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.074 |
80.172 |
0.417 |
| clpE | Streptococcus pneumoniae Rx1 |
52.074 |
80.172 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
52.074 |
80.172 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
52.074 |
80.172 |
0.417 |