Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   KX797_RS12550 Genome accession   NZ_CP079715
Coordinates   2508861..2509904 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain V8     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2503861..2514904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KX797_RS12520 (KX797_12520) - 2504279..2505535 (-) 1257 WP_001795438.1 aminopeptidase -
  KX797_RS12525 (KX797_12525) - 2505538..2505738 (-) 201 WP_000180461.1 DUF1128 family protein -
  KX797_RS12530 (KX797_12530) - 2505885..2506349 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  KX797_RS12535 (KX797_12535) - 2506356..2506631 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  KX797_RS12540 (KX797_12540) - 2506909..2508126 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  KX797_RS12545 (KX797_12545) vraR 2508242..2508871 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  KX797_RS12550 (KX797_12550) vraS 2508861..2509904 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  KX797_RS12555 (KX797_12555) liaF 2509901..2510602 (-) 702 WP_115287762.1 cell wall-active antibiotics response protein LiaF -
  KX797_RS12560 (KX797_12560) - 2510617..2511003 (-) 387 WP_219098861.1 hypothetical protein -
  KX797_RS12565 (KX797_12565) map 2511220..2511978 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  KX797_RS12570 (KX797_12570) - 2512565..2513551 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  KX797_RS12575 (KX797_12575) - 2514041..2514454 (-) 414 WP_001549145.1 hypothetical protein -
  KX797_RS12580 (KX797_12580) - 2514483..2514593 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=588811 KX797_RS12550 WP_001017131.1 2508861..2509904(-) (vraS) [Staphylococcus aureus strain V8]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=588811 KX797_RS12550 WP_001017131.1 2508861..2509904(-) (vraS) [Staphylococcus aureus strain V8]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1