Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   SA27298_RS09590 Genome accession   NZ_AP018548
Coordinates   1952190..1952336 (-) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain CCUG 27928     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1947190..1957336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS09580 (SA27298_1949) comE 1950098..1950847 (-) 750 WP_018543656.1 competence system response regulator transcription factor ComE Regulator
  SA27298_RS09585 (SA27298_1950) comD/comD2 1950847..1952172 (-) 1326 WP_211209167.1 GHKL domain-containing protein Regulator
  SA27298_RS09590 (SA27298_1951) comC 1952190..1952336 (-) 147 WP_003029519.1 bacteriocin Regulator
  SA27298_RS09600 (SA27298_1953) rlmH 1952618..1953097 (-) 480 WP_003032032.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SA27298_RS09605 (SA27298_1954) htrA 1953291..1954481 (+) 1191 WP_003032033.1 trypsin-like peptidase domain-containing protein Regulator
  SA27298_RS09610 (SA27298_1955) spo0J 1954536..1955303 (+) 768 WP_003032028.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=58871 SA27298_RS09590 WP_003029519.1 1952190..1952336(-) (comC) [Streptococcus anginosus strain CCUG 27928]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=58871 SA27298_RS09590 WP_003029519.1 1952190..1952336(-) (comC) [Streptococcus anginosus strain CCUG 27928]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396

Multiple sequence alignment