Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SA27298_RS07520 Genome accession   NZ_AP018548
Coordinates   1539528..1539986 (-) Length   152 a.a.
NCBI ID   WP_003031754.1    Uniprot ID   -
Organism   Streptococcus anginosus strain CCUG 27928     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534528..1544986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA27298_RS07500 (SA27298_1532) - 1535164..1535484 (-) 321 WP_003031767.1 PTS cellobiose transporter subunit IIA -
  SA27298_RS07505 (SA27298_1533) - 1535495..1535809 (-) 315 WP_003031794.1 PTS cellobiose transporter subunit IIB -
  SA27298_RS07510 (SA27298_1534) rcrQ 1536019..1537779 (-) 1761 WP_003031741.1 ABC transporter ATP-binding protein Regulator
  SA27298_RS07515 (SA27298_1535) rcrP 1537769..1539535 (-) 1767 WP_003031770.1 ABC transporter ATP-binding protein Regulator
  SA27298_RS07520 (SA27298_1536) rcrR 1539528..1539986 (-) 459 WP_003031754.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SA27298_RS07525 (SA27298_1537) - 1540144..1540554 (-) 411 WP_003031760.1 peptide deformylase -
  SA27298_RS07530 (SA27298_1538) scrK 1540622..1541521 (-) 900 WP_018543579.1 fructokinase ScrK -
  SA27298_RS07535 (SA27298_1539) - 1541797..1543695 (-) 1899 WP_003031802.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17907.90 Da        Isoelectric Point: 7.8790

>NTDB_id=58837 SA27298_RS07520 WP_003031754.1 1539528..1539986(-) (rcrR) [Streptococcus anginosus strain CCUG 27928]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCDKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSETDKRAKIIRLTPESKERMNKIRDFFDEMDRCLLTDISEEDLVTFFQVMGKFYQNIEKLEKGEANV

Nucleotide


Download         Length: 459 bp        

>NTDB_id=58837 SA27298_RS07520 WP_003031754.1 1539528..1539986(-) (rcrR) [Streptococcus anginosus strain CCUG 27928]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGACGAAAAACACATCTAATGATTCAAAAAATTGCCAAAGAGCGAGG
AATTGAATTTATGGCGGGTCCGCAGGGGCAGGTATTGCATTTTGTGAATCACCGCGAAGACTGTGATAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGCATTACTAAGTCCGTTGCCAGTAATTTAATGAAGCGGATGGTGAAGAATGGCTTG
ATTTATCTGGAAGTGAGTGAGACCGATAAACGCGCTAAGATTATTCGTTTAACGCCGGAATCAAAAGAGCGCATGAATAA
AATTCGTGATTTTTTTGATGAAATGGATCGTTGCCTATTGACAGATATTTCAGAAGAAGATTTGGTTACTTTTTTTCAAG
TGATGGGGAAATTTTACCAGAATATTGAAAAATTAGAAAAAGGAGAAGCGAATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.836

96.053

0.421

Multiple sequence alignment