Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | KYE72_RS10110 | Genome accession | NZ_CP079232 |
| Coordinates | 1505649..1505870 (-) | Length | 73 a.a. |
| NCBI ID | WP_404802223.1 | Uniprot ID | - |
| Organism | Bifidobacterium pseudocatenulatum strain YIT11956 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1500649..1510870
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KYE72_RS06645 (KYE72_06645) | - | 1501550..1501741 (+) | 192 | WP_162472321.1 | hypothetical protein | - |
| KYE72_RS06650 (KYE72_06650) | - | 1502161..1503258 (-) | 1098 | WP_134862788.1 | histidine kinase | - |
| KYE72_RS06655 (KYE72_06655) | - | 1503329..1504000 (-) | 672 | WP_065435295.1 | response regulator transcription factor | - |
| KYE72_RS06660 (KYE72_06660) | - | 1504090..1505637 (-) | 1548 | WP_226852015.1 | lanthionine synthetase C family protein | - |
| KYE72_RS10110 (KYE72_06665) | rcrQ | 1505649..1505870 (-) | 222 | WP_404802223.1 | ATP-binding cassette domain-containing protein | Regulator |
| KYE72_RS10020 (KYE72_06670) | - | 1505936..1506301 (-) | 366 | WP_065435292.1 | ATP-binding cassette domain-containing protein | - |
| KYE72_RS06670 (KYE72_06675) | - | 1506304..1507221 (-) | 918 | WP_226852016.1 | ABC transporter transmembrane domain-containing protein | - |
| KYE72_RS06675 (KYE72_06680) | - | 1507214..1507984 (-) | 771 | WP_081291364.1 | thioredoxin domain-containing protein | - |
| KYE72_RS06680 (KYE72_06685) | - | 1508728..1509441 (-) | 714 | WP_022245152.1 | GNAT family N-acetyltransferase | - |
| KYE72_RS06685 (KYE72_06690) | - | 1509626..1510375 (+) | 750 | WP_065435332.1 | YdcF family protein | - |
Sequence
Protein
Download Length: 73 a.a. Molecular weight: 8335.68 Da Isoelectric Point: 8.0509
>NTDB_id=588330 KYE72_RS10110 WP_404802223.1 1505649..1505870(-) (rcrQ) [Bifidobacterium pseudocatenulatum strain YIT11956]
MSLSGGQRQRLQIARACLRKAPILILDEATSNLDVKTERRVLDNLLRSHEYDISIVISHRLSTIIDSDVIFFI
MSLSGGQRQRLQIARACLRKAPILILDEATSNLDVKTERRVLDNLLRSHEYDISIVISHRLSTIIDSDVIFFI
Nucleotide
Download Length: 222 bp
>NTDB_id=588330 KYE72_RS10110 WP_404802223.1 1505649..1505870(-) (rcrQ) [Bifidobacterium pseudocatenulatum strain YIT11956]
ATGTCTTTGTCTGGTGGACAGCGACAGAGATTGCAGATTGCGAGAGCTTGTTTAAGGAAAGCTCCGATACTTATTTTGGA
TGAGGCAACGTCGAATCTTGATGTGAAGACAGAAAGACGTGTGCTTGATAACCTATTAAGATCGCATGAGTATGATATTT
CAATTGTCATTTCACATCGCTTGTCTACGATAATAGACTCAGACGTTATTTTCTTTATTTGA
ATGTCTTTGTCTGGTGGACAGCGACAGAGATTGCAGATTGCGAGAGCTTGTTTAAGGAAAGCTCCGATACTTATTTTGGA
TGAGGCAACGTCGAATCTTGATGTGAAGACAGAAAGACGTGTGCTTGATAACCTATTAAGATCGCATGAGTATGATATTT
CAATTGTCATTTCACATCGCTTGTCTACGATAATAGACTCAGACGTTATTTTCTTTATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
51.316 |
100 |
0.534 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
56.452 |
84.932 |
0.479 |
| comA | Streptococcus mitis SK321 |
58.333 |
82.192 |
0.479 |
| comA | Streptococcus pneumoniae Rx1 |
56.667 |
82.192 |
0.466 |
| comA | Streptococcus pneumoniae D39 |
56.667 |
82.192 |
0.466 |
| comA | Streptococcus pneumoniae R6 |
56.667 |
82.192 |
0.466 |
| comA/nlmT | Streptococcus mutans UA159 |
55.738 |
83.562 |
0.466 |
| comA | Streptococcus mitis NCTC 12261 |
55.738 |
83.562 |
0.466 |
| comA | Streptococcus pneumoniae TIGR4 |
55.738 |
83.562 |
0.466 |
| rcrP | Streptococcus mutans UA159 |
43.056 |
98.63 |
0.425 |
| amiE | Streptococcus thermophilus LMG 18311 |
42.188 |
87.671 |
0.37 |
| amiE | Streptococcus thermophilus LMD-9 |
42.188 |
87.671 |
0.37 |
| amiE | Streptococcus salivarius strain HSISS4 |
42.188 |
87.671 |
0.37 |