Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   KWY62_RS01120 Genome accession   NZ_CP079193
Coordinates   204310..205023 (+) Length   237 a.a.
NCBI ID   WP_012774930.1    Uniprot ID   A0A142UPI2
Organism   Streptococcus suis strain ID41570     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 199310..210023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWY62_RS01110 (KWY62_01110) treC 200391..202016 (-) 1626 WP_202847600.1 alpha,alpha-phosphotrehalase -
  KWY62_RS01115 (KWY62_01115) treP 202097..204079 (-) 1983 WP_218981900.1 PTS system trehalose-specific EIIBC component -
  KWY62_RS01120 (KWY62_01120) treR 204310..205023 (+) 714 WP_012774930.1 trehalose operon repressor Regulator
  KWY62_RS01125 (KWY62_01125) - 205081..205392 (+) 312 WP_002935948.1 hypothetical protein -
  KWY62_RS01130 (KWY62_01130) - 205389..205937 (+) 549 WP_002935945.1 CvpA family protein -
  KWY62_RS01135 (KWY62_01135) - 206432..208765 (+) 2334 WP_202847602.1 endonuclease MutS2 -
  KWY62_RS01140 (KWY62_01140) - 208788..209441 (+) 654 WP_202847603.1 GNAT family N-acetyltransferase -
  KWY62_RS01145 (KWY62_01145) - 209546..209923 (+) 378 WP_029749883.1 MerR family transcriptional regulator -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27200.07 Da        Isoelectric Point: 6.7422

>NTDB_id=588144 KWY62_RS01120 WP_012774930.1 204310..205023(+) (treR) [Streptococcus suis strain ID41570]
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQLSTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTNREERELMQSKDDYLVLIKSRVYLGDTQQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=588144 KWY62_RS01120 WP_012774930.1 204310..205023(+) (treR) [Streptococcus suis strain ID41570]
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAGAGCTCCCTACC
GACAGAACAGCAGCTTCAGGAAATCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCGTTGGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAGCAAGAAATTCTCAATTTCCCAGTTTCAGGTTTAACT
TCCTATCAGGAATTGACAAATGTTCTCCAGCTTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCATTTGACAGGCTTTGAGCCGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCGATTGACGGTAAGG
TCTCCGTTGTGGATACAGATTATCTTGCTGTCGATGTCGTGCCAGAGTTGACAACTGCTATTGCTGAAAAATCCATCTAC
GAATACCTAGAAAATAAGTTAGGCCTTGATATTGCTTATGCACAAAAAGAGATTACGGTAGAGCCGACCAATCGAGAAGA
GCGTGAGCTAATGCAATCGAAGGATGATTATTTGGTCTTGATTAAATCTCGTGTCTATCTCGGTGATACCCAGCAATTCC
AATATACAGAAAGCAAGCATAAAATTGATAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A142UPI2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

52.137

98.734

0.515