Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | M1S48_RS08105 | Genome accession | NZ_CP096698 |
| Coordinates | 1692699..1693805 (+) | Length | 368 a.a. |
| NCBI ID | WP_134232948.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 5769 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1687699..1698805
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1S48_RS08070 (M1S48_08070) | grxD | 1688044..1688385 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| M1S48_RS08075 (M1S48_08075) | - | 1688613..1689821 (+) | 1209 | WP_000129953.1 | aspartate aminotransferase family protein | - |
| M1S48_RS08080 (M1S48_08080) | - | 1689872..1690303 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| M1S48_RS08085 (M1S48_08085) | - | 1690444..1690818 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| M1S48_RS08090 (M1S48_08090) | - | 1691356..1691589 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| M1S48_RS08095 (M1S48_08095) | - | 1691805..1692164 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| M1S48_RS08100 (M1S48_08100) | - | 1692265..1692591 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| M1S48_RS08105 (M1S48_08105) | pilA | 1692699..1693805 (+) | 1107 | WP_134232948.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| M1S48_RS08110 (M1S48_08110) | - | 1693995..1694591 (+) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| M1S48_RS08115 (M1S48_08115) | - | 1694817..1695488 (+) | 672 | WP_000175350.1 | DUF2057 domain-containing protein | - |
| M1S48_RS08120 (M1S48_08120) | - | 1695561..1696085 (+) | 525 | WP_000593801.1 | GNAT family N-acetyltransferase | - |
| M1S48_RS08125 (M1S48_08125) | - | 1696098..1696397 (-) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| M1S48_RS08130 (M1S48_08130) | cydX | 1696398..1696499 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| M1S48_RS08135 (M1S48_08135) | cydB | 1696513..1697658 (-) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39947.78 Da Isoelectric Point: 4.9872
>NTDB_id=588083 M1S48_RS08105 WP_134232948.1 1692699..1693805(+) (pilA) [Acinetobacter baumannii strain 5769]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATVPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATVPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=588083 M1S48_RS08105 WP_134232948.1 1692699..1693805(+) (pilA) [Acinetobacter baumannii strain 5769]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGTGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGTGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
51.724 |
86.685 |
0.448 |