Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KWY72_RS17640 Genome accession   NZ_CP079150
Coordinates   3580291..3580887 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae subsp. pneumoniae strain WRC07_CMC432PC     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3575291..3585887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWY72_RS17625 (KWY72_17625) helD 3575499..3577553 (-) 2055 WP_004179218.1 DNA helicase IV -
  KWY72_RS17630 (KWY72_17630) - 3577678..3578124 (+) 447 WP_002898425.1 YccF domain-containing protein -
  KWY72_RS17635 (KWY72_17635) yccS 3578142..3580277 (+) 2136 WP_002898422.1 YccS family putative transporter -
  KWY72_RS17640 (KWY72_17640) sxy/tfoX 3580291..3580887 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  KWY72_RS17645 (KWY72_17645) sulA 3581236..3581745 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  KWY72_RS17650 (KWY72_17650) ompA 3582098..3583168 (+) 1071 WP_002898408.1 porin OmpA -
  KWY72_RS17655 (KWY72_17655) matP 3583300..3583752 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KWY72_RS17660 (KWY72_17660) - 3583938..3585695 (+) 1758 WP_004179203.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=587999 KWY72_RS17640 WP_004179217.1 3580291..3580887(-) (sxy/tfoX) [Klebsiella pneumoniae subsp. pneumoniae strain WRC07_CMC432PC]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=587999 KWY72_RS17640 WP_004179217.1 3580291..3580887(-) (sxy/tfoX) [Klebsiella pneumoniae subsp. pneumoniae strain WRC07_CMC432PC]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51