Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   KW861_RS09835 Genome accession   NZ_CP078505
Coordinates   2072584..2074254 (-) Length   556 a.a.
NCBI ID   WP_103299678.1    Uniprot ID   A0A2K3R058
Organism   Enterococcus gallinarum strain fecal_iso1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2067584..2079254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KW861_RS09810 (KW861_09780) pstB 2067725..2068531 (-) 807 WP_003126219.1 phosphate ABC transporter ATP-binding protein PstB -
  KW861_RS09815 (KW861_09785) pstA 2068545..2069429 (-) 885 WP_003126218.1 phosphate ABC transporter permease PstA -
  KW861_RS09820 (KW861_09790) pstC 2069429..2070349 (-) 921 WP_003126217.1 phosphate ABC transporter permease subunit PstC -
  KW861_RS09825 (KW861_09795) - 2070468..2071322 (-) 855 WP_003126216.1 phosphate ABC transporter substrate-binding protein PstS -
  KW861_RS09830 (KW861_09800) - 2071733..2072461 (-) 729 WP_103299680.1 alpha/beta hydrolase -
  KW861_RS09835 (KW861_09805) recN 2072584..2074254 (-) 1671 WP_103299678.1 DNA repair protein RecN Machinery gene
  KW861_RS09840 (KW861_09810) argR 2074267..2074716 (-) 450 WP_103299677.1 arginine repressor -
  KW861_RS09845 (KW861_09815) - 2074810..2075640 (-) 831 WP_003126211.1 TlyA family RNA methyltransferase -
  KW861_RS09850 (KW861_09820) - 2075640..2076524 (-) 885 WP_175413577.1 polyprenyl synthetase family protein -
  KW861_RS09855 (KW861_09825) - 2076533..2076751 (-) 219 WP_003126209.1 exodeoxyribonuclease VII small subunit -
  KW861_RS09860 (KW861_09830) xseA 2076732..2078084 (-) 1353 WP_003126207.1 exodeoxyribonuclease VII large subunit -
  KW861_RS09865 (KW861_09835) - 2078086..2078937 (-) 852 WP_005471160.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 556 a.a.        Molecular weight: 62774.79 Da        Isoelectric Point: 4.4634

>NTDB_id=587497 KW861_RS09835 WP_103299678.1 2072584..2074254(-) (recN) [Enterococcus gallinarum strain fecal_iso1]
MLLELTIQNFAIISHLHLSFHEGMTALTGETGAGKSIIIDAMGLLAGGRGSTDYLRQGAEKCRLEGLFEWPQQSEFQELT
EELGIDQEDVLIVQRDITQAGKTICRVNGRTVTLASLRKIGLFLVDIQGQNEHQELLQPERHLSLVDGFGDDGFKAELLH
YQDAYQEYRNLEKQVRNIQENEQLYVQRMDMLRFQQEEIAQAELIEGEEENLIEEREKLTNYQKIVDALGQSYGALSSEE
MSSVDGVSVALSEIQSIAHLDQAYEKITETIQSAYYLLQDAASDISRQLDNLELDEGRLEEVINRLETIRQLKRKYGESI
SVILAYYEEISKEISESAYTEGQLEQLEEQLTAKADAVWALAEQLHVKRREIAHRLEKEIVQELNDLYMEHAQFEVRFAN
GKQLTATGFDSVAFYLTTNPGEGMKPLVRVASGGELSRILLALKSIFSRKQGITSIVFDEVDTGVSGRVAQAIAEKISKI
ALNSQVLCITHLPQVAAVADYQYFIEKAIQEGRTETRVRQLSYEERVTEIARMLSGAEITELTVEHARELLALAHQ

Nucleotide


Download         Length: 1671 bp        

>NTDB_id=587497 KW861_RS09835 WP_103299678.1 2072584..2074254(-) (recN) [Enterococcus gallinarum strain fecal_iso1]
ATGCTTTTAGAGTTGACCATTCAAAATTTCGCAATTATTTCCCACTTACACCTTTCTTTTCATGAAGGAATGACAGCTTT
GACAGGTGAAACAGGTGCCGGGAAATCAATCATTATTGATGCGATGGGCTTGTTAGCCGGCGGACGCGGATCTACTGACT
ACTTGCGTCAAGGAGCAGAGAAATGCCGACTGGAAGGCCTTTTTGAATGGCCGCAGCAGTCTGAGTTTCAAGAACTGACA
GAAGAATTAGGCATTGATCAAGAAGATGTGCTGATCGTCCAACGGGATATCACACAAGCAGGAAAAACAATCTGTCGTGT
CAATGGACGTACGGTCACCTTGGCAAGTCTGCGAAAGATTGGTCTTTTTTTAGTTGATATTCAAGGACAAAACGAACATC
AAGAGTTATTACAGCCGGAAAGGCATCTTAGCTTGGTAGATGGGTTTGGCGATGATGGTTTCAAAGCAGAACTGTTGCAC
TATCAGGATGCCTATCAGGAATACCGCAATTTAGAAAAACAGGTTCGCAATATTCAGGAAAATGAACAATTATATGTTCA
ACGGATGGATATGCTGCGATTCCAACAAGAAGAAATCGCACAGGCTGAATTAATCGAGGGCGAAGAAGAAAATCTGATCG
AAGAACGTGAGAAGTTAACCAACTATCAGAAAATCGTCGATGCACTGGGGCAAAGTTATGGTGCGCTCTCTTCAGAAGAA
ATGAGCAGTGTCGACGGTGTAAGTGTGGCACTGTCCGAGATCCAATCTATCGCCCACTTAGATCAAGCCTATGAAAAAAT
CACTGAAACGATCCAGAGCGCTTATTATTTGTTGCAGGATGCTGCTTCTGATATTTCACGACAATTAGATAACCTTGAAC
TTGATGAAGGACGTCTAGAAGAAGTTATCAACCGACTGGAAACGATTCGTCAATTGAAGCGCAAATACGGCGAGTCCATC
TCCGTCATCCTAGCTTATTATGAAGAAATTAGTAAGGAGATCTCTGAATCTGCCTATACTGAAGGCCAGCTGGAACAGTT
AGAAGAGCAATTGACAGCTAAGGCCGATGCTGTTTGGGCTCTTGCTGAACAACTCCATGTCAAGCGGCGAGAAATCGCAC
ATCGATTAGAAAAAGAAATTGTGCAAGAATTGAACGACCTCTATATGGAACATGCACAGTTTGAAGTTCGCTTTGCAAAT
GGCAAGCAGTTGACAGCAACTGGATTTGATAGTGTGGCTTTTTATCTCACGACCAATCCTGGGGAAGGCATGAAGCCGTT
GGTTCGGGTAGCATCTGGTGGTGAGCTGTCTCGTATCTTATTAGCATTGAAATCGATTTTTTCACGGAAACAAGGGATCA
CGAGTATTGTTTTTGACGAAGTAGATACCGGAGTCAGTGGCCGCGTGGCGCAAGCAATTGCTGAAAAGATCTCAAAAATT
GCGTTGAATTCCCAAGTCTTGTGTATCACTCATTTGCCGCAAGTAGCCGCAGTAGCTGATTATCAATATTTTATTGAAAA
AGCGATCCAAGAAGGACGGACGGAGACTCGAGTTCGTCAGTTATCCTATGAAGAACGAGTGACTGAGATTGCTCGTATGT
TATCAGGAGCAGAAATCACAGAACTGACAGTAGAGCATGCGCGTGAATTGTTAGCCTTGGCTCATCAGTAA

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2K3R058

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

47.378

100

0.487