Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KVY09_RS01460 Genome accession   NZ_CP078159
Coordinates   315881..316549 (+) Length   222 a.a.
NCBI ID   WP_016930642.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain NY5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 310881..321549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVY09_RS01430 (KVY09_01430) - 311680..311781 (+) 102 WP_016930637.1 SE2200 family small protein -
  KVY09_RS01435 (KVY09_01435) - 312185..312400 (+) 216 Protein_292 DegT/DnrJ/EryC1/StrS family aminotransferase -
  KVY09_RS01440 (KVY09_01440) - 312420..313367 (+) 948 WP_016930639.1 LCP family protein -
  KVY09_RS01445 (KVY09_01445) - 313457..314932 (-) 1476 WP_016930640.1 alkaline phosphatase -
  KVY09_RS01450 (KVY09_01450) - 315331..315501 (+) 171 WP_011274728.1 hypothetical protein -
  KVY09_RS01455 (KVY09_01455) - 315687..315851 (+) 165 WP_016930641.1 hypothetical protein -
  KVY09_RS01460 (KVY09_01460) braR 315881..316549 (+) 669 WP_016930642.1 response regulator transcription factor Regulator
  KVY09_RS01465 (KVY09_01465) braS 316552..317448 (+) 897 WP_070485407.1 sensor histidine kinase Regulator
  KVY09_RS01470 (KVY09_01470) - 317623..318372 (+) 750 WP_070485409.1 ABC transporter ATP-binding protein -
  KVY09_RS01475 (KVY09_01475) - 318374..320365 (+) 1992 WP_070485411.1 ABC transporter permease -
  KVY09_RS01480 (KVY09_01480) - 320455..321228 (+) 774 WP_070485413.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25695.51 Da        Isoelectric Point: 4.6536

>NTDB_id=587401 KVY09_RS01460 WP_016930642.1 315881..316549(+) (braR) [Staphylococcus haemolyticus strain NY5]
MKVFIVEDDFIIAESLEQELSKWNYEVIVAKQFDNIIDVFHANQPQLVLLDINLPTFNGYHWCQEIRKTSNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLAVSNNEVTVKNCKLVVDEATLYHEDESVQLSFTELQILN
MLFRNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLQSIGVVDLIETKKNVGYKVS

Nucleotide


Download         Length: 669 bp        

>NTDB_id=587401 KVY09_RS01460 WP_016930642.1 315881..316549(+) (braR) [Staphylococcus haemolyticus strain NY5]
ATGAAAGTATTCATCGTGGAAGATGATTTTATCATTGCAGAAAGTTTAGAGCAAGAGTTATCGAAATGGAATTATGAGGT
CATCGTGGCTAAACAATTTGATAATATTATCGACGTATTTCATGCAAATCAACCACAACTCGTATTGCTCGATATCAATC
TACCGACATTCAATGGCTATCACTGGTGTCAGGAGATACGTAAGACTTCTAATGTACCGATTATGTTTATTAGTTCAAGA
ACCGACAATATGGATCAAATTATGGCAATTCAAATGGGCGGCGATGACTTTATCGAGAAACCATTTAATTTATCGTTAAC
TGTAACTAAGATTCAAGCATTATTACGTAGAACGTATGATTTAGCAGTGTCTAATAATGAAGTTACTGTTAAAAATTGCA
AACTTGTTGTAGATGAAGCAACACTTTACCATGAAGACGAATCGGTTCAATTGTCTTTTACTGAATTACAAATCTTAAAT
ATGTTGTTCCGCAATGAAGGTAAGTATGTCAGCCGTACCGCATTGATTGAGAAGTGTTGGGAGTCTGAGAATTTTATAGA
TGACAATACTTTAGCGGTCAATATGACACGATTGCGTAAGAAATTACAATCGATAGGTGTTGTAGATTTAATTGAAACTA
AGAAGAATGTTGGATATAAGGTGTCTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

77.376

99.55

0.77