Detailed information NTG0058736

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: ECpv15279_RS23615
• Genome accession: NZ_AP018488
• Coordinates: 4542623..4543606 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli O157:H7 strain PV15-279
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4537623..4548606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECpv15279_RS23590 (ECpv15279_4371)	bcsF	4537784..4537975 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
ECpv15279_RS23595 (ECpv15279_4372)	bcsG	4537972..4539651 (+)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
ECpv15279_RS23600 (ECpv15279_4373)	ldrD	4539738..4539845 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
ECpv15279_RS23605 (ECpv15279_4374)	yhjV	4540321..4541592 (+)	1272	WP_001306601.1	aromatic amino acid transport family protein	-
ECpv15279_RS23610 (ECpv15279_4375)	dppF	4541622..4542626 (-)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
ECpv15279_RS23615 (ECpv15279_4376)	amiE	4542623..4543606 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
ECpv15279_RS23620 (ECpv15279_4377)	dppC	4543617..4544519 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
ECpv15279_RS23625 (ECpv15279_4378)	dppB	4544529..4545548 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
ECpv15279_RS23635 (ECpv15279_4379)	dppA	4545699..4547306 (-)	1608	WP_001222888.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=58736 ECpv15279_RS23615 WP_001196486.1 4542623..4543606(-) (amiE) [Escherichia coli O157:H7 strain PV15-279]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=58736 ECpv15279_RS23615 WP_001196486.1 4542623..4543606(-) (amiE) [Escherichia coli O157:H7 strain PV15-279]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATTAG
CTACAGCGTAAAACAGGGCGAAGTAGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCGATGGCCATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCTTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404