Detailed information NTG0058700

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: K749_RS03300
• Genome accession: NC_021216
• Coordinates: 665816..667255 (+)
• Length: 479 a.a.
• NCBI ID: WP_015645709.1
• Uniprot ID: -
• Organism: Helicobacter pylori UM299
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 660816..672255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K749_RS03270 (K749_06290)	thyX	660816..661442 (-)	627	WP_015645705.1	FAD-dependent thymidylate synthase	-
K749_RS03275 (K749_06295)	glmS	661464..663257 (-)	1794	WP_015645706.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
K749_RS03280 (K749_06300)	-	663258..663497 (-)	240	WP_000461845.1	DUF2443 domain-containing protein	-
K749_RS03285 (K749_06305)	-	663533..664075 (-)	543	WP_015645707.1	purine-nucleoside phosphorylase	-
K749_RS03290 (K749_06310)	dnaA	664228..665595 (+)	1368	WP_015645708.1	chromosomal replication initiator protein DnaA	-
K749_RS03300 (K749_06315)	comH	665816..667255 (+)	1440	WP_015645709.1	hypothetical protein	Machinery gene
K749_RS03310 (K749_06320)	-	667433..668185 (+)	753	WP_015645710.1	exodeoxyribonuclease III	-
K749_RS03315 (K749_06325)	-	668182..668817 (-)	636	WP_000668051.1	outer membrane protein	-
K749_RS03320 (K749_06330)	-	668821..669174 (-)	354	WP_000837005.1	hypothetical protein	-
K749_RS03325 (K749_06335)	recG	669256..671121 (+)	1866	WP_015645711.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55071.91 Da
• Isoelectric Point: 7.4338

>NTDB_id=58700 K749_RS03300 WP_015645709.1 665816..667255(+) (comH) [Helicobacter pylori UM299]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETILNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNVPIQKPQNKPTSSQQSSQNFSYSESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLRHSSEDQENNLFVTPPTEKTLPNNTPNADTNEHNENNENRDNVEKQTIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQTEPTFYETNELAYSSTRKSEVKQNEL
NLNDKFMEFVEVYERHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=58700 K749_RS03300 WP_015645709.1 665816..667255(+) (comH) [Helicobacter pylori UM299]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAGGCCAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGATCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCCACACCAAATGCCTTCTTTAAACGTGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTTCTCAAAACTTCTCTTACTCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTG
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAGGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATACTA
ATGAACACAATGAAAACAATGAGAATAGGGATAATGTGGAAAAACAAACGATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAACCGCAAACTTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGTAAAAGGGCCAGAGCGCGAAAAGACGGCACGACCAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAACGAATTGGCTTATTCTTCCACACGAAAGAGTGAAGTTAAGCAAAATGAATTG
AATTTGAATGATAAGTTCATGGAATTTGTGGAAGTGTATGAGAGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.232	100	0.912