Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   KWZ00_RS08775 Genome accession   NZ_CP078115
Coordinates   1663422..1664126 (+) Length   234 a.a.
NCBI ID   WP_010951331.1    Uniprot ID   Q5F649
Organism   Neisseria gonorrhoeae strain O1G1370     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1658422..1669126
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KWZ00_RS08755 (KWZ00_08755) trpC 1659521..1660303 (-) 783 WP_003689906.1 indole-3-glycerol phosphate synthase TrpC -
  KWZ00_RS08760 (KWZ00_08760) - 1660354..1661313 (-) 960 WP_003705245.1 YheT family hydrolase -
  KWZ00_RS08765 (KWZ00_08765) murJ 1661446..1662984 (-) 1539 WP_003689904.1 murein biosynthesis integral membrane protein MurJ -
  KWZ00_RS08775 (KWZ00_08775) dsbA1 1663422..1664126 (+) 705 WP_010951331.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  KWZ00_RS08780 (KWZ00_08780) amgK 1664183..1665187 (-) 1005 WP_003689901.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  KWZ00_RS08785 (KWZ00_08785) - 1665257..1667662 (+) 2406 WP_003689900.1 LPS-assembly protein LptD -
  KWZ00_RS08790 (KWZ00_08790) - 1667764..1668765 (+) 1002 WP_003691902.1 peptidylprolyl isomerase -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25420.13 Da        Isoelectric Point: 5.6758

>NTDB_id=586946 KWZ00_RS08775 WP_010951331.1 1663422..1664126(+) (dsbA1) [Neisseria gonorrhoeae strain O1G1370]
MKSRHLALALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHC
ARLEPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQ
TAFDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 705 bp        

>NTDB_id=586946 KWZ00_RS08775 WP_010951331.1 1663422..1664126(+) (dsbA1) [Neisseria gonorrhoeae strain O1G1370]
ATGAAATCCAGACACCTCGCCCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAAC
CAGCGTCCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGACTGGTCGAAGGGCAAAACTACACCG
TCCTTGCCAACCCGATTCCCCAACAGCAGGCAGGCAAGGTTGAAGTGCTTGAGTTTTTCGGCTATTTTTGTCCGCACTGC
GCCCGCCTCGAACCTGTTTTGAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTG
GCAGAAAGAAATGCTGCCGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGAAAGCAAAGATGTGGCGAACA
GCCATATTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAA
ACCGCCTTTGACGGCAAAAAAGTCCTTGCCGCCTACGAATCCCCCGAAAGTCAGGCGCGCGCCGGCAAAATGCAGGAGCT
GACCGAAACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGT
CCGGTATGAACACCATCGACCTTTTGGCGGACAAAGTACGTGAAGAACAAAAAGCCGCGCAGTAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(65-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5F649

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

97.009

100

0.97
  dsbA2 Neisseria meningitidis MC58

76.19

80.769

0.615