Detailed information
Bioinformatically predicted
Overview
| Name | pilC | Type | Machinery gene |
| Locus tag | KWY94_RS02950 | Genome accession | NZ_CP078113 |
| Coordinates | 558338..561463 (-) | Length | 1041 a.a. |
| NCBI ID | WP_218461129.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain O2D156 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 543315..562174 | 558338..561463 | within | 0 |
Gene organization within MGE regions
Location: 543315..562174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KWY94_RS02885 (KWY94_02885) | orn | 543694..544257 (-) | 564 | WP_003687260.1 | oligoribonuclease | - |
| KWY94_RS02890 (KWY94_02890) | prmA | 544275..545162 (-) | 888 | WP_003687261.1 | 50S ribosomal protein L11 methyltransferase | - |
| KWY94_RS02895 (KWY94_02895) | accC | 545266..546627 (-) | 1362 | WP_003687264.1 | acetyl-CoA carboxylase biotin carboxylase subunit | - |
| KWY94_RS02900 (KWY94_02900) | accB | 546739..547200 (-) | 462 | WP_003687267.1 | acetyl-CoA carboxylase biotin carboxyl carrier protein | - |
| KWY94_RS02905 (KWY94_02905) | - | 547182..547439 (-) | 258 | WP_003687268.1 | hypothetical protein | - |
| KWY94_RS02910 (KWY94_02910) | queA | 547556..548596 (+) | 1041 | WP_003687270.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| KWY94_RS02915 (KWY94_02915) | carB | 548797..552012 (-) | 3216 | WP_218461128.1 | carbamoyl-phosphate synthase large subunit | - |
| KWY94_RS02920 (KWY94_02920) | - | 552019..552567 (-) | 549 | WP_003687274.1 | hypothetical protein | - |
| KWY94_RS02925 (KWY94_02925) | - | 552570..553133 (-) | 564 | WP_002214615.1 | ComF family protein | - |
| KWY94_RS02930 (KWY94_02930) | - | 554317..554706 (-) | 390 | WP_003687278.1 | endonuclease domain-containing protein | - |
| KWY94_RS02935 (KWY94_02935) | - | 554869..555248 (-) | 380 | Protein_558 | VOC family protein | - |
| KWY94_RS02940 (KWY94_02940) | carA | 555302..556435 (-) | 1134 | WP_025456026.1 | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | - |
| KWY94_RS02945 (KWY94_02945) | - | 557150..557434 (-) | 285 | WP_003692093.1 | GIY-YIG nuclease family protein | - |
| KWY94_RS02950 (KWY94_02950) | pilC | 558338..561463 (-) | 3126 | WP_218461129.1 | PilC family type IV pilus tip adhesin | Machinery gene |
Sequence
Protein
Download Length: 1041 a.a. Molecular weight: 114151.81 Da Isoelectric Point: 9.8131
>NTDB_id=586829 KWY94_RS02950 WP_218461129.1 558338..561463(-) (pilC) [Neisseria gonorrhoeae strain O2D156]
MNKTLKRRVFRHTALYTAILMFSHTGGGGGGWQAQARDYAIIMNGRNQPEVKSNVPSSIKDKDRKRTFSHTSQTNWLGQQ
NNFISFDNSDELVSQQSGTAVFDTATYLPPYGKVSGFDTDRLKKRGNAVDWIRTTRIALAGYSYEGVVCRSGTGCPKLVY
KTRFSFDNPDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLGSENTVKDSKLSNKLISSFSEDNNNQNIVSTTRD
HPISLGDSKREHTAVAYYLNAKLHLLDKKGIGDIAPGKTVRLGLLKPSIDVRKENTGLSGIISFNATWDIKDTGQIPVKL
GLPEVKAGRCTNTAHPNKTAQAPSPALTAPALWFGPGQDGKVQMYSASVSTYPGSSSSKIFLQNLSRNDDKNKPGRYSLK
PLSENEIKSKEPSFMGRQTIIRLDDGVHLIRLSRSKDEVIDFVNLNGNNTGKNDTFGIVKEANVNLEADEWKKVLLPWTV
RAAADDGRFKSINQKPDKYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPG
TMPRKDIESKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLSKINGNYPAA
APLFDVKDGDNNGKNRVEVKLGYTVGTPQIGKIRNGKYAAFLASGYAAKKIDGPTNTTALYVYDLNDTLGTPIAKIEVKD
GKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDSNPDKWSVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLS
EQDVLDTEEQYIYGIFDDDTEAGNVKVDPKGLGGGLLEQVLSEENKILFLTNNKASGGSNGKGWVVKLKEGQRVTVKPTV
VLRTAFVTIRKYTDTDKCGAQTAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSIPIGCMWKNGKTVCPNGY
VYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVF
F
MNKTLKRRVFRHTALYTAILMFSHTGGGGGGWQAQARDYAIIMNGRNQPEVKSNVPSSIKDKDRKRTFSHTSQTNWLGQQ
NNFISFDNSDELVSQQSGTAVFDTATYLPPYGKVSGFDTDRLKKRGNAVDWIRTTRIALAGYSYEGVVCRSGTGCPKLVY
KTRFSFDNPDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLGSENTVKDSKLSNKLISSFSEDNNNQNIVSTTRD
HPISLGDSKREHTAVAYYLNAKLHLLDKKGIGDIAPGKTVRLGLLKPSIDVRKENTGLSGIISFNATWDIKDTGQIPVKL
GLPEVKAGRCTNTAHPNKTAQAPSPALTAPALWFGPGQDGKVQMYSASVSTYPGSSSSKIFLQNLSRNDDKNKPGRYSLK
PLSENEIKSKEPSFMGRQTIIRLDDGVHLIRLSRSKDEVIDFVNLNGNNTGKNDTFGIVKEANVNLEADEWKKVLLPWTV
RAAADDGRFKSINQKPDKYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYIPG
TMPRKDIESKDSTLAKELRTFAEKGYVGDRYGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLSKINGNYPAA
APLFDVKDGDNNGKNRVEVKLGYTVGTPQIGKIRNGKYAAFLASGYAAKKIDGPTNTTALYVYDLNDTLGTPIAKIEVKD
GKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSDSNPDKWSVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLS
EQDVLDTEEQYIYGIFDDDTEAGNVKVDPKGLGGGLLEQVLSEENKILFLTNNKASGGSNGKGWVVKLKEGQRVTVKPTV
VLRTAFVTIRKYTDTDKCGAQTAILGINTADGGALTPRSARPIVPDNQVAQYSGHQKMNGKSIPIGCMWKNGKTVCPNGY
VYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVF
F
Nucleotide
Download Length: 3126 bp
>NTDB_id=586829 KWY94_RS02950 WP_218461129.1 558338..561463(-) (pilC) [Neisseria gonorrhoeae strain O2D156]
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATACCGCCATATTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGTGGCAGGCGCAAGCCCGTGACTACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGTCGA
ATGTGCCATCTTCAATAAAGGACAAAGACAGGAAGCGGACATTTAGCCATACGAGCCAGACAAACTGGTTGGGCCAACAA
AACAATTTTATTTCATTCGACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGACACAGCCACCTA
CCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAAAGCGCGGCAATGCCGTTGATTGGATTCGTA
CCACCCGCATCGCGCTGGCAGGCTACAGCTACGAAGGTGTCGTATGCAGAAGCGGCACAGGCTGTCCCAAACTTGTCTAT
AAAACCCGATTTTCCTTCGATAATCCCGACTTGGTAAAAAATGCGGGCAAGCTGGATAGGTACACAGACCTAAGCCGCGA
AAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCAAAG
ATAGCAAATTATCCAACAAATTGATATCTTCTTTTAGTGAAGACAATAATAATCAAAACATCGTCTCTACGACACGAGAC
CACCCTATTTCCCTTGGCGACTCGAAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGA
TAAAAAAGGGATTGGAGATATCGCGCCAGGCAAAACAGTGCGGTTGGGTCTCTTGAAGCCGAGCATCGATGTGCGGAAAG
AAAATACGGGGCTTAGCGGCATTATATCTTTTAATGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTC
GGCCTGCCGGAAGTCAAAGCAGGCCGCTGCACCAACACCGCCCACCCCAATAAAACAGCCCAAGCCCCTTCGCCGGCACT
GACCGCCCCCGCGCTGTGGTTCGGACCTGGGCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCG
GCAGCTCGAGCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAA
CCCTTGAGTGAGAATGAGATTAAAAGTAAAGAGCCGAGTTTCATGGGGCGGCAAACAATCATCCGATTGGATGACGGCGT
ACATTTGATCAGACTGAGTAGAAGCAAGGATGAGGTCATCGATTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACG
ACACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTT
CGTGCTGCTGCCGATGACGGTCGATTTAAATCAATTAACCAAAAACCAGACAAATACAGCCAAAGATACCGCATCCGCGA
AAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACG
ACGGGATGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGT
ACGATGCCGCGCAAGGATATTGAAAGCAAAGACTCCACCCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGT
GGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGCAAAAACATTTCTTTA
TGTTTGGTGCGATGGGCCTGGGCGGCAGAGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCC
GCTCCCCTGTTTGATGTCAAAGATGGCGATAATAACGGCAAAAATCGCGTGGAAGTGAAATTAGGCTACACCGTCGGTAC
GCCGCAAATCGGCAAAATCCGCAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAAAAATTGACGGCC
CAACAAATACAACCGCGCTGTATGTATATGATTTGAACGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGAC
GGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCG
GGGCGGCAATATGTACCGCTTTGATTTGAGCGATTCCAATCCTGATAAATGGTCTGTACGCACTATTTTCCAAGGCACAA
AACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGAGT
GAACAGGATGTACTCGATACGGAAGAACAATATATTTACGGTATCTTCGACGACGATACGGAGGCGGGTAATGTAAAGGT
AGACCCCAAAGGTTTGGGAGGCGGGCTGCTCGAGCAAGTGCTTAGCGAGGAAAATAAAATCTTGTTCCTGACAAATAATA
AGGCATCCGGCGGATCGAACGGCAAAGGCTGGGTAGTGAAATTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTG
GTATTGCGTACCGCCTTTGTGACCATCCGGAAATATACGGATACGGACAAATGTGGCGCGCAAACCGCCATTTTGGGCAT
CAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGGTTGCGCAATATTCCG
GCCATCAGAAAATGAACGGCAAGTCCATCCCCATAGGCTGCATGTGGAAAAACGGCAAAACCGTCTGCCCGAACGGATAT
GTTTACGACAAACCGGTTAATGTGCGTTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGC
AGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCC
TGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTC
TTCTGA
ATGAATAAAACTTTAAAAAGGCGGGTTTTCCGCCATACCGCGCTTTATACCGCCATATTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGTGGCAGGCGCAAGCCCGTGACTACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGTCGA
ATGTGCCATCTTCAATAAAGGACAAAGACAGGAAGCGGACATTTAGCCATACGAGCCAGACAAACTGGTTGGGCCAACAA
AACAATTTTATTTCATTCGACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGACACAGCCACCTA
CCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAAAGCGCGGCAATGCCGTTGATTGGATTCGTA
CCACCCGCATCGCGCTGGCAGGCTACAGCTACGAAGGTGTCGTATGCAGAAGCGGCACAGGCTGTCCCAAACTTGTCTAT
AAAACCCGATTTTCCTTCGATAATCCCGACTTGGTAAAAAATGCGGGCAAGCTGGATAGGTACACAGACCTAAGCCGCGA
AAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCAAAG
ATAGCAAATTATCCAACAAATTGATATCTTCTTTTAGTGAAGACAATAATAATCAAAACATCGTCTCTACGACACGAGAC
CACCCTATTTCCCTTGGCGACTCGAAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGA
TAAAAAAGGGATTGGAGATATCGCGCCAGGCAAAACAGTGCGGTTGGGTCTCTTGAAGCCGAGCATCGATGTGCGGAAAG
AAAATACGGGGCTTAGCGGCATTATATCTTTTAATGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTC
GGCCTGCCGGAAGTCAAAGCAGGCCGCTGCACCAACACCGCCCACCCCAATAAAACAGCCCAAGCCCCTTCGCCGGCACT
GACCGCCCCCGCGCTGTGGTTCGGACCTGGGCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCG
GCAGCTCGAGCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAA
CCCTTGAGTGAGAATGAGATTAAAAGTAAAGAGCCGAGTTTCATGGGGCGGCAAACAATCATCCGATTGGATGACGGCGT
ACATTTGATCAGACTGAGTAGAAGCAAGGATGAGGTCATCGATTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACG
ACACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTT
CGTGCTGCTGCCGATGACGGTCGATTTAAATCAATTAACCAAAAACCAGACAAATACAGCCAAAGATACCGCATCCGCGA
AAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATTTGGCAACCGCCGCGAACG
ACGGGATGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGT
ACGATGCCGCGCAAGGATATTGAAAGCAAAGACTCCACCCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGT
GGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGCAAAAACATTTCTTTA
TGTTTGGTGCGATGGGCCTGGGCGGCAGAGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCC
GCTCCCCTGTTTGATGTCAAAGATGGCGATAATAACGGCAAAAATCGCGTGGAAGTGAAATTAGGCTACACCGTCGGTAC
GCCGCAAATCGGCAAAATCCGCAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAAAAATTGACGGCC
CAACAAATACAACCGCGCTGTATGTATATGATTTGAACGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGAC
GGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCG
GGGCGGCAATATGTACCGCTTTGATTTGAGCGATTCCAATCCTGATAAATGGTCTGTACGCACTATTTTCCAAGGCACAA
AACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGAGT
GAACAGGATGTACTCGATACGGAAGAACAATATATTTACGGTATCTTCGACGACGATACGGAGGCGGGTAATGTAAAGGT
AGACCCCAAAGGTTTGGGAGGCGGGCTGCTCGAGCAAGTGCTTAGCGAGGAAAATAAAATCTTGTTCCTGACAAATAATA
AGGCATCCGGCGGATCGAACGGCAAAGGCTGGGTAGTGAAATTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTG
GTATTGCGTACCGCCTTTGTGACCATCCGGAAATATACGGATACGGACAAATGTGGCGCGCAAACCGCCATTTTGGGCAT
CAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATAACCAGGTTGCGCAATATTCCG
GCCATCAGAAAATGAACGGCAAGTCCATCCCCATAGGCTGCATGTGGAAAAACGGCAAAACCGTCTGCCCGAACGGATAT
GTTTACGACAAACCGGTTAATGTGCGTTACCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGC
AGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCC
TGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTC
TTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilC | Neisseria meningitidis A1493 |
70.888 |
100 |
0.72 |