Detailed information NTG0058679

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: K747_RS03295
• Genome accession: NC_021215
• Coordinates: 665815..667254 (+)
• Length: 479 a.a.
• NCBI ID: WP_015645709.1
• Uniprot ID: -
• Organism: Helicobacter pylori UM032
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 660815..672254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K747_RS03265 (K747_03525)	thyX	660815..661441 (-)	627	WP_015645705.1	FAD-dependent thymidylate synthase	-
K747_RS03270 (K747_03530)	glmS	661463..663256 (-)	1794	WP_015645706.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
K747_RS03275 (K747_03535)	-	663257..663496 (-)	240	WP_000461845.1	DUF2443 domain-containing protein	-
K747_RS03280 (K747_03540)	-	663532..664074 (-)	543	WP_015645707.1	purine-nucleoside phosphorylase	-
K747_RS03285 (K747_12620)	dnaA	664227..665594 (+)	1368	WP_015645708.1	chromosomal replication initiator protein DnaA	-
K747_RS03295 (K747_03550)	comH	665815..667254 (+)	1440	WP_015645709.1	hypothetical protein	Machinery gene
K747_RS03305 (K747_03555)	-	667432..668184 (+)	753	WP_015645710.1	exodeoxyribonuclease III	-
K747_RS03310 (K747_03560)	-	668181..668816 (-)	636	WP_000668051.1	outer membrane protein	-
K747_RS03315 (K747_03565)	-	668820..669173 (-)	354	WP_000837005.1	hypothetical protein	-
K747_RS03320 (K747_03570)	recG	669255..671120 (+)	1866	WP_015645711.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55071.91 Da
• Isoelectric Point: 7.4338

>NTDB_id=58679 K747_RS03295 WP_015645709.1 665815..667254(+) (comH) [Helicobacter pylori UM032]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETILNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNVPIQKPQNKPTSSQQSSQNFSYSESKLGSKNPKNSLLQPL
ATPNKISSANEVKTPTNDTKPPLRHSSEDQENNLFVTPPTEKTLPNNTPNADTNEHNENNENRDNVEKQTIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQTEPTFYETNELAYSSTRKSEVKQNEL
NLNDKFMEFVEVYERHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=58679 K747_RS03295 WP_015645709.1 665815..667254(+) (comH) [Helicobacter pylori UM032]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCACATAAAGGCACTTTTAAGGCCAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGATCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCACACCCACACCAAATGCCTTCTTTAAACGTGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAATCTTCTCAAAACTTCTCTTACTCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTG
GCCACTCCTAATAAAATAAGCTCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAGGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATACTA
ATGAACACAATGAAAACAATGAGAATAGGGATAATGTGGAAAAACAAACGATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAACCGCAAACTTTTGAAGCTAAAAACAATTTTACCATTCTCCAAGCCAGA
AGCTCTACAGAAAAATGTAAAAGGGCCAGAGCGCGAAAAGACGGCACGACCAGGCAATGCTATCTCATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATCAAATCACCACGCAATTAGTGAAAGCTGTATATGAGCGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAACGAATTGGCTTATTCTTCCACACGAAAGAGTGAAGTTAAGCAAAATGAATTG
AATTTGAATGATAAGTTCATGGAATTTGTGGAAGTGTATGAGAGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.232	100	0.912