Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   M1F50_RS13350 Genome accession   NZ_CP096528
Coordinates   2689483..2690370 (-) Length   295 a.a.
NCBI ID   WP_000143420.1    Uniprot ID   -
Organism   Staphylococcus aureus strain RIVM_M084986     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2684483..2695370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M1F50_RS13330 (M1F50_13310) - 2684766..2684879 (-) 114 WP_014937089.1 hypothetical protein -
  M1F50_RS13335 (M1F50_13315) - 2685548..2687548 (-) 2001 WP_000776741.1 ABC transporter permease -
  M1F50_RS13340 (M1F50_13320) - 2687545..2688300 (-) 756 WP_000923768.1 ABC transporter ATP-binding protein -
  M1F50_RS13345 (M1F50_13325) - 2688452..2689399 (+) 948 WP_000121214.1 IS30-like element ISSau1 family transposase -
  M1F50_RS13350 (M1F50_13330) braS 2689483..2690370 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  M1F50_RS13355 (M1F50_13335) braR 2690381..2691046 (-) 666 WP_000697873.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  M1F50_RS13360 (M1F50_13340) - 2691072..2691272 (-) 201 WP_000604731.1 hypothetical protein -
  M1F50_RS13365 (M1F50_13345) - 2691470..2692894 (+) 1425 WP_000953736.1 alkaline phosphatase -
  M1F50_RS13370 (M1F50_13350) - 2692964..2693074 (+) 111 WP_001791296.1 hypothetical protein -
  M1F50_RS13375 (M1F50_13355) - 2693177..2693632 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  M1F50_RS13380 (M1F50_13360) - 2693876..2694637 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34045.32 Da        Isoelectric Point: 5.8962

>NTDB_id=586637 M1F50_RS13350 WP_000143420.1 2689483..2690370(-) (braS) [Staphylococcus aureus strain RIVM_M084986]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=586637 M1F50_RS13350 WP_000143420.1 2689483..2690370(-) (braS) [Staphylococcus aureus strain RIVM_M084986]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTTATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTGGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterProScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993