Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KU891_RS19095 Genome accession   NZ_CP078081
Coordinates   3757269..3757727 (+) Length   152 a.a.
NCBI ID   WP_061401480.1    Uniprot ID   -
Organism   Bacillus tropicus strain EMB20     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3752269..3762727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU891_RS19080 (KU891_19020) - 3752929..3753165 (+) 237 WP_000283743.1 hypothetical protein -
  KU891_RS19085 (KU891_19025) - 3753339..3755447 (-) 2109 WP_000423559.1 polyphosphate kinase -
  KU891_RS19090 (KU891_19030) - 3755556..3757091 (-) 1536 WP_000658861.1 Ppx/GppA family phosphatase -
  KU891_RS19095 (KU891_19035) kre 3757269..3757727 (+) 459 WP_061401480.1 YkyB family protein Regulator
  KU891_RS19100 (KU891_19040) - 3757759..3758421 (-) 663 WP_000922488.1 YkyA family protein -
  KU891_RS19105 (KU891_19045) - 3759056..3759697 (-) 642 WP_000680832.1 diguanylate cyclase -
  KU891_RS19110 (KU891_19050) - 3759862..3760095 (+) 234 WP_071678861.1 SPP1 phage holin family protein -
  KU891_RS19115 (KU891_19055) - 3760127..3760627 (-) 501 WP_071678862.1 hypothetical protein -
  KU891_RS19120 (KU891_19060) - 3761055..3762596 (+) 1542 WP_000445746.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17771.52 Da        Isoelectric Point: 10.6793

>NTDB_id=586607 KU891_RS19095 WP_061401480.1 3757269..3757727(+) (kre) [Bacillus tropicus strain EMB20]
MKPSQPQSQLQNQHSINRLAQAVFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPIPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=586607 KU891_RS19095 WP_061401480.1 3757269..3757727(+) (kre) [Bacillus tropicus strain EMB20]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAAGCTGTTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAACCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTATCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

66.379

76.316

0.507