Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   KU891_RS05920 Genome accession   NZ_CP078081
Coordinates   1162352..1162528 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus tropicus strain EMB20     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1157352..1167528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU891_RS05900 (KU891_05895) clpC 1157685..1160285 (+) 2601 WP_000365389.1 ATP-dependent chaperone ClpB Regulator
  KU891_RS05905 (KU891_05900) - 1160323..1160505 (-) 183 WP_001211116.1 YjzD family protein -
  KU891_RS05910 (KU891_05905) - 1160662..1161396 (+) 735 WP_000028701.1 hydrolase -
  KU891_RS05915 (KU891_05910) - 1161426..1162298 (+) 873 WP_033668777.1 NAD(P)-dependent oxidoreductase -
  KU891_RS05920 (KU891_05915) comZ 1162352..1162528 (+) 177 WP_009879752.1 ComZ family protein Regulator
  KU891_RS05925 (KU891_05920) fabH 1162920..1163852 (+) 933 WP_001100536.1 beta-ketoacyl-ACP synthase III -
  KU891_RS05930 (KU891_05925) fabF 1163884..1165122 (+) 1239 WP_000412651.1 beta-ketoacyl-ACP synthase II -
  KU891_RS05935 (KU891_05930) - 1165229..1166017 (+) 789 WP_139888655.1 DUF2268 domain-containing putative Zn-dependent protease -
  KU891_RS05940 (KU891_05935) - 1166161..1166907 (+) 747 WP_000966137.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=586594 KU891_RS05920 WP_009879752.1 1162352..1162528(+) (comZ) [Bacillus tropicus strain EMB20]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=586594 KU891_RS05920 WP_009879752.1 1162352..1162528(+) (comZ) [Bacillus tropicus strain EMB20]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586