Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   EVX74_RS01775 Genome accession   NZ_CP078045
Coordinates   413191..414756 (-) Length   521 a.a.
NCBI ID   WP_005265495.1    Uniprot ID   N9PGU1
Organism   Acinetobacter lwoffii strain AL_065     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 408191..419756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EVX74_RS01760 (EVX74_001750) gpmI 409001..410548 (+) 1548 WP_005265492.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  EVX74_RS01765 (EVX74_001755) - 410578..411750 (+) 1173 WP_005265493.1 S41 family peptidase -
  EVX74_RS18540 - 411751..411933 (-) 183 Protein_344 helix-turn-helix domain-containing protein -
  EVX74_RS01770 (EVX74_001760) - 412006..413176 (-) 1171 Protein_345 sigma-54-dependent transcriptional regulator -
  EVX74_RS01775 (EVX74_001765) pilS 413191..414756 (-) 1566 WP_005265495.1 sensor histidine kinase Regulator
  EVX74_RS01780 (EVX74_001770) - 414779..415414 (-) 636 WP_004281059.1 response regulator transcription factor GacA -
  EVX74_RS01785 (EVX74_001775) - 415633..416694 (+) 1062 WP_005249689.1 serine hydrolase -
  EVX74_RS01790 (EVX74_001780) thrC 416754..417893 (-) 1140 WP_005265496.1 threonine synthase -
  EVX74_RS01795 (EVX74_001785) - 417950..419257 (-) 1308 WP_005263945.1 homoserine dehydrogenase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59450.58 Da        Isoelectric Point: 6.2548

>NTDB_id=586494 EVX74_RS01775 WP_005265495.1 413191..414756(-) (pilS) [Acinetobacter lwoffii strain AL_065]
MAQQSSYSALNQYHLGIWYSAYRLLISTGLLLIFLLTYPELTTDYQYPQLYYYALGIGVAINTVQLFALKWIRRLIQPQL
VMIFFSDVCILSLLTLASDGPNLQIGLLFVITIFSASLLLDAKKALVVTLVAVISVIYQHFIGSIFAFSSLSNISNSALL
AFLFFVVYGTGQIAIRRFQILENLNFSQSLELHRLQNINRYILEQIETGYLVLDENYHVVLSNPAACNLLGIESKYGHEK
FTLSQSQPDLFELIHFETLENGERFQFESQQSRYNIHVQVQKLIVPHQTLMLLVLQDAKKLNQQVQQLKLAALGQLSASI
AHEIRNPLAAIVQANDLYLDSETEQQQLLQQMIGRQATRIDRIIQDTLNMVKNKETHPIPIHLNDFIPLFIQEDLADIHD
QIQFNIDIPLVIQFDEAQFRQILINLIRNAIRHNSADAAYIQLNVHPYEHRVWIDVRDFGSGVAVHDQALLFKPFFSTSI
SGTGLGLYLSHSFCEANQAQLNYIQQEQGACFRISCQRITL

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=586494 EVX74_RS01775 WP_005265495.1 413191..414756(-) (pilS) [Acinetobacter lwoffii strain AL_065]
ATGGCACAACAATCCAGTTATTCTGCACTCAATCAATATCATCTTGGTATCTGGTATAGCGCCTATCGCCTGCTAATCAG
CACCGGCCTGCTGCTGATTTTTCTGCTAACCTACCCTGAACTCACCACCGATTATCAATACCCGCAGCTGTATTATTATG
CGCTGGGAATCGGGGTTGCGATCAATACCGTACAGCTGTTTGCGCTGAAATGGATCAGACGACTGATCCAGCCGCAGCTG
GTCATGATTTTCTTTAGCGATGTCTGCATTTTAAGTTTGCTGACTTTGGCGAGCGACGGTCCTAATCTGCAAATCGGGCT
GCTGTTTGTGATTACCATCTTTTCTGCATCTTTATTATTAGATGCAAAAAAGGCCTTAGTCGTCACGCTGGTTGCTGTTA
TCAGCGTAATTTATCAGCATTTTATCGGCAGTATTTTTGCATTTTCATCACTCAGCAATATCAGTAATAGCGCCTTGCTG
GCCTTTTTATTTTTTGTGGTCTATGGCACTGGGCAGATCGCCATACGCCGTTTTCAGATTCTGGAAAATCTAAATTTTTC
TCAATCGCTGGAACTGCATCGCTTACAGAATATTAACCGCTATATTCTGGAGCAGATTGAAACCGGCTATCTGGTTCTGG
ATGAAAACTACCATGTGGTACTCAGTAATCCTGCCGCCTGTAATCTTCTTGGAATTGAGTCCAAATACGGCCATGAGAAA
TTCACTTTATCTCAGTCACAGCCAGATTTATTTGAACTGATCCATTTTGAGACACTGGAAAATGGTGAGCGCTTTCAGTT
TGAATCTCAGCAAAGTCGCTATAATATTCATGTGCAGGTGCAAAAACTGATTGTGCCACATCAGACTCTAATGCTACTGG
TGTTACAGGATGCCAAAAAACTGAATCAGCAGGTGCAGCAACTTAAACTTGCTGCACTGGGTCAACTCTCGGCCAGTATT
GCCCATGAAATTCGCAACCCCCTAGCTGCCATTGTGCAAGCCAATGATTTATATCTGGACTCGGAAACTGAACAGCAACA
GCTACTCCAGCAGATGATTGGCCGACAGGCGACCCGGATTGACCGGATTATTCAGGACACGCTGAATATGGTCAAAAATA
AAGAAACCCATCCTATACCGATTCATCTCAATGATTTTATCCCGTTATTTATCCAGGAAGATCTGGCCGATATTCATGAT
CAGATTCAATTTAATATTGATATCCCTTTGGTAATTCAGTTTGATGAAGCACAATTCCGGCAAATCCTCATTAATCTGAT
TCGTAATGCCATTCGTCACAATTCAGCAGATGCAGCCTATATTCAGCTGAATGTGCATCCCTATGAACATCGGGTCTGGA
TTGATGTACGGGATTTTGGCTCTGGCGTAGCCGTACATGATCAGGCCTTATTGTTTAAACCCTTTTTTAGTACATCGATT
AGTGGTACCGGATTAGGATTGTATTTATCACATAGTTTTTGCGAAGCAAATCAGGCACAATTAAACTATATACAACAAGA
ACAGGGCGCATGCTTTCGCATCAGCTGTCAACGTATTACGCTTTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-515)

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9PGU1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

56.634

96.929

0.549