Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   EGT69_RS14905 Genome accession   NZ_CP078018
Coordinates   3111840..3112367 (-) Length   175 a.a.
NCBI ID   WP_004909624.1    Uniprot ID   S7WVB7
Organism   Acinetobacter junii strain AJ_351     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3106840..3117367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT69_RS14885 (EGT69_014885) - 3107065..3107943 (-) 879 WP_125297959.1 hypothetical protein -
  EGT69_RS14890 (EGT69_014890) aroB 3107960..3109042 (-) 1083 WP_125272580.1 3-dehydroquinate synthase -
  EGT69_RS14895 (EGT69_014895) aroK 3109063..3109623 (-) 561 WP_004909618.1 shikimate kinase AroK -
  EGT69_RS14900 (EGT69_014900) pilQ 3109643..3111778 (-) 2136 WP_167543108.1 type IV pilus secretin PilQ family protein Machinery gene
  EGT69_RS14905 (EGT69_014905) pilP 3111840..3112367 (-) 528 WP_004909624.1 pilus assembly protein PilP Machinery gene
  EGT69_RS14910 (EGT69_014910) pilO 3112367..3113107 (-) 741 WP_004964600.1 type 4a pilus biogenesis protein PilO Machinery gene
  EGT69_RS14915 (EGT69_014915) pilN 3113104..3113748 (-) 645 WP_004909633.1 PilN domain-containing protein Machinery gene
  EGT69_RS14920 (EGT69_014920) pilM 3113748..3114806 (-) 1059 WP_004909635.1 pilus assembly protein PilM Machinery gene

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19460.68 Da        Isoelectric Point: 9.3195

>NTDB_id=586390 EGT69_RS14905 WP_004909624.1 3111840..3112367(-) (pilP) [Acinetobacter junii strain AJ_351]
MNNYKLLFSFMAGLVLVGCDSKIDAVNQKMAEIRNEPALPIEPAPVFSPVPLFNYSAHQLKSPFMPSSLAAELKIMAGKR
VYPNFNRQPQPLESYALESLNMKGSMRGKTNETIALIQTPDRQIERVQVGNYLGMNQGRVVKISPTQIDLVEIVPDGRDG
YVERPRTLVLIGMAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=586390 EGT69_RS14905 WP_004909624.1 3111840..3112367(-) (pilP) [Acinetobacter junii strain AJ_351]
ATGAATAATTATAAATTATTATTTAGTTTTATGGCTGGGCTTGTTTTGGTTGGGTGTGATTCAAAAATTGACGCCGTAAA
CCAAAAAATGGCTGAAATTCGGAACGAACCTGCTTTACCTATTGAGCCAGCACCGGTATTTAGCCCTGTACCATTATTTA
ACTATTCAGCACATCAATTGAAAAGTCCATTTATGCCAAGCTCATTGGCGGCTGAGTTAAAGATAATGGCGGGTAAACGC
GTTTATCCAAATTTCAATCGTCAACCGCAACCACTTGAAAGTTATGCGTTGGAATCCCTAAATATGAAGGGTAGCATGCG
TGGTAAAACAAATGAAACGATAGCACTGATTCAGACCCCGGACCGACAAATTGAGCGGGTGCAGGTTGGAAATTACTTAG
GAATGAATCAAGGTCGAGTGGTAAAAATTAGTCCGACTCAAATTGATTTGGTGGAAATTGTACCAGATGGGCGTGATGGT
TATGTGGAGAGACCAAGAACACTCGTTCTAATTGGTATGGCACCATAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S7WVB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

79.532

97.714

0.777
  comL Acinetobacter baylyi ADP1

70.286

100

0.703