Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   EGT69_RS14730 Genome accession   NZ_CP078018
Coordinates   3073635..3074183 (-) Length   182 a.a.
NCBI ID   WP_125297309.1    Uniprot ID   -
Organism   Acinetobacter junii strain AJ_351     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3068635..3079183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT69_RS14720 (EGT69_014720) - 3071777..3072631 (-) 855 WP_125297307.1 hypothetical protein -
  EGT69_RS14725 (EGT69_014725) pilW 3072628..3073635 (-) 1008 WP_125297308.1 PilW family protein Machinery gene
  EGT69_RS14730 (EGT69_014730) pilV 3073635..3074183 (-) 549 WP_125297309.1 type IV pilus modification protein PilV Machinery gene
  EGT69_RS14735 (EGT69_014735) - 3074183..3074683 (-) 501 WP_125297310.1 pilus assembly FimT family protein -
  EGT69_RS14740 (EGT69_014740) ispH 3074824..3075774 (-) 951 WP_125297311.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  EGT69_RS14745 (EGT69_014745) gmk 3075877..3076500 (+) 624 WP_004909574.1 guanylate kinase -
  EGT69_RS14750 (EGT69_014750) rpoZ 3076571..3076849 (+) 279 WP_004909577.1 DNA-directed RNA polymerase subunit omega -
  EGT69_RS14755 (EGT69_014755) - 3077058..3079163 (+) 2106 WP_005403310.1 RelA/SpoT family protein -

Sequence

Protein


Download         Length: 182 a.a.        Molecular weight: 19113.11 Da        Isoelectric Point: 8.2140

>NTDB_id=586388 EGT69_RS14730 WP_125297309.1 3073635..3074183(-) (pilV) [Acinetobacter junii strain AJ_351]
MNTYKNQKGVGLVEVLVALLLLAVGVLGYTILQLRAVDASSEALMRSQGIMVLRGLSENMRANPAAQNSYPAAVRTYTNI
TATPTAPTRVCFNPAATATCTPAQMATYDAFMAAKSAFDLGMNITMDNCPGVASAPVKRQCLYAAWGDTAISATNTAANV
STCMSATGVYVNGSKCLMMEAY

Nucleotide


Download         Length: 549 bp        

>NTDB_id=586388 EGT69_RS14730 WP_125297309.1 3073635..3074183(-) (pilV) [Acinetobacter junii strain AJ_351]
ATGAATACCTATAAAAATCAAAAAGGTGTTGGATTGGTTGAGGTGTTGGTTGCTTTATTGCTGCTTGCCGTAGGGGTATT
GGGATATACCATTTTACAACTTCGGGCAGTTGATGCTTCTAGTGAGGCTTTAATGCGTTCGCAGGGGATTATGGTATTAC
GTGGACTGAGTGAGAATATGCGAGCCAACCCCGCTGCTCAGAATAGTTATCCTGCTGCCGTGAGAACCTATACTAATATA
ACTGCGACACCTACAGCCCCGACAAGAGTTTGTTTTAATCCAGCAGCCACTGCAACGTGTACACCAGCACAAATGGCAAC
CTACGATGCCTTTATGGCAGCAAAATCTGCCTTTGATCTTGGCATGAATATTACCATGGATAATTGTCCTGGAGTCGCGT
CTGCACCAGTAAAAAGACAATGCCTATATGCCGCCTGGGGGGATACTGCAATTAGTGCAACCAATACAGCTGCGAATGTA
AGTACATGCATGAGCGCAACGGGTGTATATGTAAATGGTTCTAAATGTTTAATGATGGAGGCATATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(5-28)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Acinetobacter baumannii D1279779

57.143

100

0.593
  pilV Acinetobacter baylyi ADP1

40

100

0.407