Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   EGT69_RS02335 Genome accession   NZ_CP078018
Coordinates   509837..512062 (-) Length   741 a.a.
NCBI ID   WP_171425324.1    Uniprot ID   A0A8F6MJS7
Organism   Acinetobacter junii strain AJ_351     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 504837..517062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGT69_RS02315 (EGT69_002315) - 505430..505756 (-) 327 WP_004763725.1 chaperone modulator CbpM -
  EGT69_RS02320 (EGT69_002320) - 505768..506733 (-) 966 WP_005403596.1 DnaJ C-terminal domain-containing protein -
  EGT69_RS02325 (EGT69_002325) - 506987..507862 (-) 876 WP_125297373.1 Hsp33 family molecular chaperone HslO -
  EGT69_RS02330 (EGT69_002330) - 507982..509802 (-) 1821 WP_125297372.1 cation:proton antiporter -
  EGT69_RS02335 (EGT69_002335) priA 509837..512062 (-) 2226 WP_171425324.1 primosomal protein N' Machinery gene
  EGT69_RS02340 (EGT69_002340) gspF 512263..513468 (+) 1206 WP_004957567.1 type II secretion system inner membrane protein GspF -
  EGT69_RS02345 (EGT69_002345) gspG 513492..513929 (+) 438 WP_004916750.1 type II secretion system major pseudopilin GspG -
  EGT69_RS02350 (EGT69_002350) - 514180..514536 (+) 357 WP_125297370.1 hypothetical protein -
  EGT69_RS02355 (EGT69_002355) lnt 514592..516151 (-) 1560 WP_125297369.1 apolipoprotein N-acyltransferase -
  EGT69_RS02360 (EGT69_002360) - 516148..516987 (-) 840 WP_004916742.1 HlyC/CorC family transporter -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 84071.84 Da        Isoelectric Point: 8.2908

>NTDB_id=586367 EGT69_RS02335 WP_171425324.1 509837..512062(-) (priA) [Acinetobacter junii strain AJ_351]
MPTENSNAILYRIRVALPVYVYDTFDYTVSAEQYLQAQIGARVSVSFGRQNLIGIITEKVDPNEPFTGQFKLKPITALLD
EDAILDQQVLTLLTWSAQYYQFPIGEVMQSALPALLRQGRALDILFHHWNILAHDDPESLLKRSQKQYDAYQILKLHPHG
ATENILNLSGVETATLKALEKKGLVECQLEAHDFTPMPVQLAQMPLTPNEDQKRAIQQILKAQQRYQAFLLDGLTGSGKT
EVYLQVMHEVLKQGKQVLVLVPEIGLTPQTVARFKSRFHCDVALLHSGLNDSKRLQAWQHAQTGKASIIIGTRSAIYTPL
PHLGLIILDEEHDLSYKQQEGFRYHTRDVALYRGHLHNCPVILGSATPSIDSYHLVESGKLHLLELNQRAGTAVLPKMHV
IDLKVAKKKNGISQNLIDQIKLTLERKEQVLIFLNRRGYAPVLLCESCGWQANCPHCDAHFTVHSQPYSYLHCHHCGTIN
RLPDECPACKHQTLKSIGAGTAKVEEQLHELFPHHEVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFPH
VTLVAILDIDSGLLSVDPRAPERTAQLIIQVAGRAGRGEHKGSVYLQSLRPDHPMLTTLIEQDYRAVAKQMLSERKVAML
PPYRYAVLVRVESKDRDYSQQFLMEAAQDLRAIAADIIEIWGPIPAPMERKAGRYRAHMVILSADRAKLHFYLRQWWQQV
VHLPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=586367 EGT69_RS02335 WP_171425324.1 509837..512062(-) (priA) [Acinetobacter junii strain AJ_351]
ATGCCTACCGAAAATTCTAACGCTATTCTTTACCGTATTCGAGTTGCATTACCCGTCTATGTGTATGACACGTTTGACTA
TACGGTCAGTGCAGAGCAATACCTGCAAGCTCAAATAGGCGCACGTGTTTCTGTTTCATTTGGTCGCCAAAACCTGATCG
GTATCATTACTGAGAAAGTTGATCCAAATGAGCCGTTTACAGGGCAATTCAAACTTAAACCGATTACAGCACTTCTTGAT
GAAGATGCTATCTTAGACCAACAAGTTTTAACTTTGTTGACATGGTCTGCGCAGTATTATCAATTCCCGATTGGTGAAGT
GATGCAAAGTGCACTTCCTGCACTTTTAAGACAGGGTCGTGCCTTAGATATTTTATTTCACCACTGGAATATTCTTGCGC
ATGACGATCCAGAATCTTTATTAAAACGTTCTCAAAAGCAATACGATGCCTATCAGATTCTAAAACTTCATCCACATGGC
GCTACCGAAAATATTTTAAATCTTAGTGGTGTAGAAACTGCAACATTAAAGGCATTGGAAAAAAAAGGACTAGTTGAATG
TCAGCTTGAAGCTCATGACTTTACACCGATGCCTGTACAACTTGCACAAATGCCTTTAACGCCGAACGAAGATCAAAAGC
GAGCAATCCAACAAATACTCAAAGCTCAACAACGTTACCAAGCCTTTTTACTAGATGGACTTACAGGCAGTGGTAAAACC
GAAGTCTATTTGCAAGTCATGCATGAGGTCCTAAAGCAAGGTAAACAAGTTTTGGTGTTGGTGCCTGAAATTGGTTTGAC
ACCTCAAACAGTCGCACGCTTCAAATCACGTTTTCATTGCGATGTTGCTTTACTACACTCGGGACTTAATGATTCAAAAC
GTTTGCAAGCTTGGCAACATGCACAAACTGGTAAAGCATCTATCATCATTGGAACGCGCTCTGCGATTTACACCCCTTTG
CCGCATCTAGGTTTGATCATCTTAGATGAAGAACACGATCTCTCTTATAAACAACAAGAGGGTTTCCGTTATCATACTCG
TGATGTTGCCCTTTATCGTGGTCATTTACACAATTGCCCTGTGATTTTGGGTTCAGCTACACCAAGTATTGATAGTTATC
ATCTAGTGGAGTCTGGCAAATTACATTTACTTGAACTCAATCAACGTGCTGGAACTGCGGTCTTACCGAAAATGCATGTG
ATTGATCTAAAAGTAGCAAAGAAGAAAAATGGCATCAGTCAAAACCTAATTGATCAAATTAAATTAACTTTAGAGCGCAA
AGAACAGGTTCTTATCTTTCTAAACCGTCGAGGTTACGCTCCTGTTTTACTGTGTGAAAGTTGTGGGTGGCAAGCAAACT
GCCCACATTGTGATGCACATTTCACTGTACATTCACAGCCTTATTCTTATTTACACTGTCATCATTGCGGTACGATCAAT
CGCCTGCCAGACGAATGCCCTGCTTGTAAACATCAAACGTTAAAAAGCATTGGTGCTGGAACTGCAAAAGTTGAAGAACA
GTTACACGAGTTATTCCCCCATCATGAAGTGATTCGGGTAGATCGTGACAGTACAAGTCGTGTGGGTAGTTGGCAAAAAA
TCTATGATCGAATTCAACAGAATAAACCAAGCATTTTGTTAGGCACTCAAATGCTGGCGAAGGGACATCATTTCCCACAC
GTCACATTAGTCGCTATTCTGGATATCGACTCAGGATTATTAAGCGTAGACCCAAGAGCACCTGAGCGCACAGCACAATT
AATCATACAAGTTGCAGGACGTGCAGGACGTGGTGAACATAAAGGCAGCGTGTATTTACAAAGTTTAAGACCCGATCATC
CAATGCTCACAACCTTGATTGAACAAGACTATCGTGCTGTTGCAAAACAAATGCTGAGTGAGCGTAAAGTTGCGATGTTA
CCGCCTTATCGTTACGCTGTTTTAGTCCGTGTGGAGTCGAAAGATCGTGATTATAGTCAACAGTTTTTAATGGAAGCAGC
ACAAGACTTAAGAGCTATTGCAGCAGATATTATTGAAATTTGGGGACCTATTCCTGCCCCAATGGAACGCAAAGCAGGGC
GTTATCGAGCACATATGGTGATTTTATCTGCCGACCGAGCAAAACTGCATTTTTATTTACGTCAATGGTGGCAACAAGTG
GTACATTTACCTCGCCAACATCAACTCAGATTATCAATTGATGTTGATCCACAAGAGTTTAGTTGA

Domains

Predicted by InterproScan.

Primosomal protein N C-terminal domain (PriA_C)

(642-737)

Helicase conserved C-terminal domain (Helicase_C)

(532-598)

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(14-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

81.597

99.73

0.814