Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   KV238_RS05540 Genome accession   NZ_CP078012
Coordinates   1129548..1130273 (+) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_18-036     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1124548..1135273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV238_RS05510 (KV238_05510) tsaE 1125004..1125447 (+) 444 WP_021320420.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  KV238_RS05515 (KV238_05515) - 1125440..1125967 (+) 528 WP_014622377.1 GNAT family N-acetyltransferase -
  KV238_RS05520 (KV238_05520) brpA 1125968..1127230 (+) 1263 WP_043025293.1 biofilm formation/cell division transcriptional regulator BrpA -
  KV238_RS05525 (KV238_05525) - 1127394..1127696 (-) 303 WP_230923342.1 chemotaxis protein -
  KV238_RS05530 (KV238_05530) - 1127693..1128112 (-) 420 WP_012515079.1 HIT family protein -
  KV238_RS05535 (KV238_05535) - 1128568..1129011 (-) 444 WP_165626963.1 hypothetical protein -
  KV238_RS05540 (KV238_05540) pptA 1129548..1130273 (+) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  KV238_RS05545 (KV238_05545) - 1130277..1131311 (+) 1035 WP_165626962.1 ABC transporter permease -
  KV238_RS05550 (KV238_05550) ccrZ 1131374..1132165 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  KV238_RS05555 (KV238_05555) trmB 1132165..1132800 (+) 636 WP_043030508.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KV238_RS05565 (KV238_05565) rimP 1133133..1133615 (+) 483 WP_165626969.1 ribosome maturation factor RimP -
  KV238_RS05570 (KV238_05570) nusA 1133725..1134879 (+) 1155 WP_012515088.1 transcription termination factor NusA -
  KV238_RS05575 (KV238_05575) rnpM 1134895..1135191 (+) 297 WP_012678426.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=586262 KV238_RS05540 WP_012678429.1 1129548..1130273(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=586262 KV238_RS05540 WP_012678429.1 1129548..1130273(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTATGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGTTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGTGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGACAGGTGCGTGCACAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73