Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MZN68_RS08550 Genome accession   NZ_CP096117
Coordinates   1702427..1703395 (+) Length   322 a.a.
NCBI ID   WP_002221667.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DFS-1910310016     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1697427..1708395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN68_RS08530 (MZN68_08415) - 1697529..1697675 (-) 147 WP_002240086.1 hypothetical protein -
  MZN68_RS08535 (MZN68_08420) fetA 1698437..1700599 (+) 2163 WP_002221665.1 TonB-dependent siderophore receptor FetA/FrpB -
  MZN68_RS08540 (MZN68_08425) - 1701298..1702263 (+) 966 WP_002221666.1 siderophore ABC transporter substrate-binding protein -
  MZN68_RS08545 (MZN68_08430) - 1702281..1702430 (+) 150 WP_162013446.1 hypothetical protein -
  MZN68_RS08550 (MZN68_08435) ceuB 1702427..1703395 (+) 969 WP_002221667.1 ABC transporter permease Machinery gene
  MZN68_RS08555 (MZN68_08440) - 1703385..1704359 (+) 975 WP_002221668.1 iron chelate uptake ABC transporter family permease subunit -
  MZN68_RS08560 (MZN68_08445) - 1704403..1705029 (+) 627 WP_002224674.1 hypothetical protein -
  MZN68_RS08565 (MZN68_08450) - 1705109..1705867 (+) 759 WP_002221671.1 ABC transporter ATP-binding protein -
  MZN68_RS08570 (MZN68_08455) - 1706195..1707370 (+) 1176 WP_002247897.1 YadA C-terminal domain-containing protein -
  MZN68_RS08575 (MZN68_08460) - 1707436..1707774 (-) 339 WP_002218119.1 P-II family nitrogen regulator -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34451.77 Da        Isoelectric Point: 9.9393

>NTDB_id=586076 MZN68_RS08550 WP_002221667.1 1702427..1703395(+) (ceuB) [Neisseria meningitidis strain DFS-1910310016]
MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
ENEMLQMLGVWQQGDFSGVLLGRYELLWATGILALFAYLIADRLTILGLGETVSVNLGLNRTAILWSGLIIVALITSLVI
VTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAY
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=586076 MZN68_RS08550 WP_002221667.1 1702427..1703395(+) (ceuB) [Neisseria meningitidis strain DFS-1910310016]
ATGACTGCCAAACCTTTTTCCCTCAACCTGACCAACCTGCTGCTGCTGGCGGTGTTGTTTGCCGTCAGCCTGTCGGTGGG
CGTTGCCGATTTCCGCTGGTCTGATGTGTTTTCACTGTCCGACAGCCAGCAGGTCATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGCTGACGGGCGCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTTTGATGCGTAACCGTTTTGTC
GAGCCTTCTATGGCGGGCGCGGGTCAGAGTGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGTTAATCGGGATGTTGGTGTTTATGATGCTTATCCGCCGCCTGCCGC
CGACGGCGCAACTGATGGTGCCTTTGGTCGGGATTATTTTCGGCGGCGTGGTTGAGGCGGTGGCCACCTTTATTGCGTAT
GAAAACGAAATGCTGCAAATGCTGGGCGTGTGGCAACAGGGCGATTTTTCCGGCGTGTTGCTCGGACGGTATGAACTGTT
GTGGGCAACGGGGATTTTGGCTTTGTTTGCCTATTTGATTGCCGACCGGCTGACGATTTTGGGTTTGGGCGAAACGGTAA
GCGTGAACTTGGGGCTGAACCGGACGGCGATTCTGTGGTCGGGGCTGATTATTGTGGCTTTGATTACGTCGCTGGTCATC
GTTACGGTCGGCAATATTCCGTTTGTCGGGCTGGTCGTGCCGAACATCATCAGCCGCCTGATAGGCGACAGGCTGCGCCA
AAGCCTGCCTGCGGTGGCTTTGTTGGGCGCGTCTTTGGTGTTGCTGTGCGACATTATCGGACGCGTGATTGTGTTTCCGT
TTGAAATTCCGGTCTCTACGGTTTTTGGTGTATTGGGTACGGCTTTGTTTTTGTGGCTTTTGTTGAGGAAACCCGCCTAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.86

93.478

0.391