Detailed information    

insolico Bioinformatically predicted

Overview

Name   cqsA   Type   Regulator
Locus tag   MZN67_RS13850 Genome accession   NZ_CP096116
Coordinates   3092396..3093658 (+) Length   420 a.a.
NCBI ID   WP_061691932.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain DFS-2111020037     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 3087396..3098658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN67_RS13815 (MZN67_13765) - 3087724..3088023 (-) 300 WP_061691929.1 helix-turn-helix transcriptional regulator -
  MZN67_RS13820 (MZN67_13770) - 3088258..3088602 (-) 345 WP_061691930.1 hypothetical protein -
  MZN67_RS13825 (MZN67_13775) - 3088719..3089348 (+) 630 WP_061691931.1 trimeric intracellular cation channel family protein -
  MZN67_RS13830 (MZN67_13780) - 3089557..3090051 (-) 495 WP_010948425.1 peptidylprolyl isomerase -
  MZN67_RS13835 (MZN67_13785) tgt 3090078..3091229 (-) 1152 WP_014842761.1 tRNA guanosine(34) transglycosylase Tgt -
  MZN67_RS13840 (MZN67_13790) - 3091291..3091782 (-) 492 WP_027265564.1 disulfide bond formation protein B -
  MZN67_RS13845 (MZN67_13795) - 3091779..3092207 (-) 429 WP_011216591.1 cytochrome c5 family protein -
  MZN67_RS13850 (MZN67_13800) cqsA 3092396..3093658 (+) 1263 WP_061691932.1 quorum-sensing autoinducer LAI-1 synthase LqsA Regulator
  MZN67_RS13855 (MZN67_13805) - 3093728..3094753 (-) 1026 WP_010948430.1 response regulator -
  MZN67_RS13860 (MZN67_13810) - 3095035..3095598 (+) 564 WP_040147738.1 HdeD family acid-resistance protein -
  MZN67_RS13865 (MZN67_13815) - 3095686..3096975 (-) 1290 WP_038839724.1 HAMP domain-containing sensor histidine kinase -
  MZN67_RS13870 (MZN67_13820) hemC 3097366..3098295 (+) 930 WP_027265568.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 46638.20 Da        Isoelectric Point: 9.1347

>NTDB_id=586013 MZN67_RS13850 WP_061691932.1 3092396..3093658(+) (cqsA) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
MSNTEYQTIDNKTQYINGKEKHQNHAYPEYINHSMEKYYEGRVNKSWQGKHILKGKTPTANSLIFSSNDYLNISQHPQLI
KAQIAAMQKYGNGQMQSAVFLNNSSFLLSQCEKKFSSFLNYSAALLTQSGWSANVGLIQTLAKYNTPVYLDFYAHMSFWS
GVKAARAKPVPFLHNSADSLKKRIEHHGPGIIAVDSIYSTLGTISPLADYADIARKFKCLLIVDESHSLGTHGSQGKGMV
AKLGLSSQIDIITASLAKALSGRGGIITGDRQLIEYIRYSSLPSIFSSALMPHDLAGFSASLEIITQEEWRRAKLQTNAD
FLREALSCEGINIGGSNSQIVPLVTGSEANTLWLRDELEKEDLFGAVFCSPATPKNKCLIRLSISAHHEKSDLLRVIECL
VRLARKRPDIPLFKGNQQDF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=586013 MZN67_RS13850 WP_061691932.1 3092396..3093658(+) (cqsA) [Legionella pneumophila subsp. pneumophila strain DFS-2111020037]
ATGAGCAATACAGAATACCAAACAATTGATAACAAGACTCAATATATCAATGGAAAAGAAAAACATCAAAACCATGCTTA
TCCTGAGTACATCAATCATTCCATGGAAAAATATTACGAGGGACGAGTCAATAAATCCTGGCAAGGGAAACACATACTTA
AAGGCAAAACCCCGACTGCAAATTCACTGATTTTTTCGAGCAATGATTATTTAAACATCAGTCAACATCCGCAATTAATT
AAAGCGCAAATTGCTGCGATGCAAAAATATGGTAATGGTCAAATGCAATCTGCTGTATTTTTAAATAACAGCTCTTTTTT
GCTCAGCCAATGTGAAAAGAAATTCAGTTCCTTTTTAAATTATTCTGCGGCACTGCTCACTCAATCAGGCTGGAGCGCTA
ACGTTGGTCTCATACAAACCCTGGCCAAGTACAATACACCAGTGTATCTGGATTTTTATGCCCATATGTCTTTTTGGTCT
GGTGTAAAAGCAGCAAGAGCCAAACCTGTACCGTTTCTACATAATTCAGCCGATTCACTAAAAAAACGAATTGAGCACCA
TGGGCCAGGAATAATTGCAGTAGATTCTATTTATAGTACGCTGGGTACGATTAGTCCATTGGCTGACTATGCTGACATTG
CAAGAAAATTCAAATGTTTGCTCATCGTCGATGAATCTCATTCATTAGGTACGCATGGTTCGCAAGGCAAGGGGATGGTA
GCTAAACTGGGATTATCAAGCCAAATAGACATCATAACAGCAAGCCTGGCTAAAGCCTTATCAGGACGGGGAGGCATCAT
TACAGGAGATAGGCAACTTATAGAATATATCAGATATTCATCTCTACCCTCTATTTTTAGTTCTGCTTTAATGCCTCATG
ATTTAGCAGGATTTAGCGCATCATTAGAAATTATTACTCAAGAAGAATGGAGAAGAGCAAAATTACAAACCAATGCTGAT
TTTTTACGAGAAGCCTTATCATGCGAAGGAATTAATATAGGAGGTAGTAATTCTCAAATAGTCCCTTTAGTTACAGGCAG
CGAGGCTAACACGCTTTGGTTAAGGGATGAGTTAGAAAAAGAAGACCTCTTCGGAGCCGTGTTCTGTTCACCCGCCACTC
CCAAAAATAAATGCCTGATTCGTTTATCCATCAGCGCGCATCACGAAAAATCGGACTTGCTCAGAGTGATTGAGTGCCTG
GTCAGACTTGCAAGAAAAAGACCCGATATTCCTTTGTTTAAGGGTAATCAACAAGACTTCTAA

Domains

Predicted by InterProScan.

Aminotransferase class I and II (Aminotran_1_2)

(63-398)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cqsA Vibrio cholerae strain A1552

45.43

88.571

0.402