Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   KVP03_RS04590 Genome accession   NZ_CP077959
Coordinates   929128..930165 (+) Length   345 a.a.
NCBI ID   WP_230923255.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_14-145     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 924128..935165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVP03_RS04565 (KVP03_04540) - 924441..925772 (+) 1332 WP_043025442.1 dipeptidase -
  KVP03_RS04570 (KVP03_04545) arcC 925790..926740 (+) 951 WP_230923253.1 carbamate kinase -
  KVP03_RS04575 (KVP03_04550) asnA 926960..927952 (+) 993 WP_012515219.1 aspartate--ammonia ligase -
  KVP03_RS04580 (KVP03_04555) rsmD 928121..928660 (+) 540 WP_230923254.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  KVP03_RS04585 (KVP03_04560) coaD 928650..929150 (+) 501 WP_111692280.1 pantetheine-phosphate adenylyltransferase -
  KVP03_RS04590 (KVP03_04565) sepM 929128..930165 (+) 1038 WP_230923255.1 SepM family pheromone-processing serine protease Regulator
  KVP03_RS04595 (KVP03_04570) - 930785..931399 (+) 615 WP_012678319.1 YutD family protein -
  KVP03_RS04600 (KVP03_04575) rlmN 931403..932485 (+) 1083 WP_043029472.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  KVP03_RS10590 - 932908..933219 (-) 312 WP_230923256.1 peptidase -
  KVP03_RS04610 (KVP03_04585) - 933756..934286 (+) 531 WP_012515230.1 Dps family protein -
  KVP03_RS04615 (KVP03_04590) - 934656..934889 (+) 234 WP_012678314.1 YqgQ family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37502.13 Da        Isoelectric Point: 9.4223

>NTDB_id=585654 KVP03_RS04590 WP_230923255.1 929128..930165(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
MKTIKKFKWWLIGFVALLFLLLTLFFPLPYYIEMPGGAYDIRSVLTVNGKEDKEKGAYQFVVVSLSRATLAKLLYAWLTP
FTEISTMEDTTGGYSDADYLRINRFYMETSQNSAVYQALTLAGKEVSFDYKGVYVLDVSKDSSFKGVLHLADTVTGVNGK
TFTTSADLIDYVSHLTLGDEVQVQFTTAGESKTEKGKIIKLKNGKNGIGITLTDHTQVISGDEVDFSTGGVGGPSAGLMF
TLDIYDQINHEDLRKGRVIAGTGTIGKDGKVGDIGGAGLKVAAAAAAGADIFFVPNNPVHKDVKKANPKTISNYEEAKKA
AKRLKTAMKIIPVKTVQDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=585654 KVP03_RS04590 WP_230923255.1 929128..930165(+) (sepM) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
ATGAAAACAATAAAAAAATTTAAATGGTGGCTGATTGGCTTTGTTGCCTTGCTTTTTCTACTGTTGACACTGTTTTTCCC
CTTGCCTTATTATATTGAAATGCCAGGTGGAGCCTATGATATTCGCTCGGTATTGACTGTCAATGGCAAAGAGGATAAGG
AAAAGGGAGCTTATCAGTTTGTTGTAGTGAGCCTCAGTCGGGCCACCTTGGCTAAATTGCTCTATGCTTGGCTAACGCCT
TTCACTGAGATTAGCACCATGGAAGATACTACTGGTGGCTATAGCGATGCTGACTACCTGCGAATTAATCGCTTTTATAT
GGAAACCTCTCAAAACAGCGCTGTTTATCAGGCCCTTACTCTAGCAGGCAAGGAGGTAAGCTTTGATTATAAGGGTGTTT
ATGTCTTAGACGTCAGCAAGGATTCTAGCTTTAAAGGTGTGCTGCACCTAGCAGATACAGTGACAGGTGTCAATGGTAAA
ACATTTACAACGTCTGCCGATCTGATTGATTATGTTTCTCATTTGACCTTGGGAGATGAGGTGCAGGTACAATTTACAAC
CGCTGGTGAGTCAAAGACTGAAAAAGGAAAGATTATTAAGCTTAAAAACGGTAAAAATGGGATTGGCATTACCCTGACAG
ACCACACACAGGTCATTTCTGGTGATGAGGTCGACTTTAGCACCGGAGGTGTGGGTGGACCAAGTGCAGGCTTGATGTTT
ACTCTTGATATTTATGATCAAATCAATCACGAAGACTTGCGCAAGGGACGTGTGATTGCTGGTACAGGAACCATTGGCAA
GGATGGAAAAGTTGGAGATATTGGCGGGGCGGGCCTAAAGGTGGCTGCCGCCGCCGCTGCTGGTGCTGATATTTTCTTTG
TTCCAAATAATCCTGTGCATAAGGACGTCAAAAAAGCAAATCCTAAGACTATTAGCAATTACGAGGAGGCTAAAAAAGCA
GCTAAACGACTAAAGACAGCAATGAAAATTATTCCTGTGAAAACCGTTCAAGATGCTATAAGCTACCTTAAAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.855

100

0.699