Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   KVP03_RS03980 Genome accession   NZ_CP077959
Coordinates   793155..793880 (+) Length   241 a.a.
NCBI ID   WP_012678429.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_14-145     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 788155..798880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVP03_RS03950 (KVP03_03925) tsaE 788613..789056 (+) 444 WP_021320420.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  KVP03_RS03955 (KVP03_03930) - 789049..789576 (+) 528 WP_014622377.1 GNAT family N-acetyltransferase -
  KVP03_RS03960 (KVP03_03935) brpA 789577..790839 (+) 1263 WP_165625996.1 biofilm formation/cell division transcriptional regulator BrpA -
  KVP03_RS03965 (KVP03_03940) - 791009..791305 (-) 297 WP_012679094.1 hypothetical protein -
  KVP03_RS03970 (KVP03_03945) - 791302..791721 (-) 420 WP_043030506.1 HIT family protein -
  KVP03_RS03975 (KVP03_03950) - 792173..792616 (-) 444 WP_165626963.1 hypothetical protein -
  KVP03_RS03980 (KVP03_03955) pptA 793155..793880 (+) 726 WP_012678429.1 ABC transporter ATP-binding protein Regulator
  KVP03_RS03985 (KVP03_03960) - 793884..794918 (+) 1035 WP_111692232.1 ABC transporter permease -
  KVP03_RS03990 (KVP03_03965) ccrZ 794981..795772 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  KVP03_RS03995 (KVP03_03970) trmB 795772..796407 (+) 636 WP_043038649.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  KVP03_RS04005 (KVP03_03980) rimP 797798..798280 (+) 483 WP_042670147.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26506.80 Da        Isoelectric Point: 4.8615

>NTDB_id=585652 KVP03_RS03980 WP_012678429.1 793155..793880(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
MLNIENVTGGYLNIPVLKDISFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLAEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAHKRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAIADLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=585652 KVP03_RS03980 WP_012678429.1 793155..793880(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
ATGTTAAACATTGAGAATGTCACTGGAGGCTACCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTCGGAAATGG
AGAGCTAGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCTT
ATAAGGGAAGGATTTCCATTGATGGCTTAACCTTGGCGGAGCATGAAGCTGATTATCGCAAGAAAATTGGCTTTATCCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTAGCTATGGCCTATGATATTGATGTGGA
GCTGGCACATAAGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGTTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGCGCTTTTGTCATTGACCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGGCTTGACCCCTTAGCAATTGCTGATTTGATTAAGGCTTTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGACAGGTGCGTGCACAAG
GGACTCTGGCGGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCGCTGACAAAAGAG
GGGTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.477

99.17

0.739
  pptA Streptococcus thermophilus LMD-9

73.64

99.17

0.73