Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KVP03_RS01395 Genome accession   NZ_CP077959
Coordinates   296448..297221 (+) Length   257 a.a.
NCBI ID   WP_015898719.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_14-145     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 291448..302221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVP03_RS01385 (KVP03_01380) rlmH 294416..294895 (-) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KVP03_RS01390 (KVP03_01385) htrA 295105..296328 (+) 1224 WP_012516520.1 S1C family serine protease Regulator
  KVP03_RS01395 (KVP03_01390) spo0J 296448..297221 (+) 774 WP_015898719.1 ParB/RepB/Spo0J family partition protein Regulator
  KVP03_RS01400 (KVP03_01395) dnaA 297456..298808 (+) 1353 WP_014622072.1 chromosomal replication initiator protein DnaA -
  KVP03_RS01405 (KVP03_01400) dnaN 298965..300101 (+) 1137 WP_012514682.1 DNA polymerase III subunit beta -
  KVP03_RS01410 (KVP03_01405) - 300179..300376 (+) 198 WP_012677176.1 DUF951 domain-containing protein -
  KVP03_RS01415 (KVP03_01410) - 300499..300861 (+) 363 WP_169724974.1 helix-turn-helix domain-containing protein -
  KVP03_RS01420 (KVP03_01415) ychF 300945..302060 (+) 1116 WP_012514685.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29144.80 Da        Isoelectric Point: 9.7975

>NTDB_id=585635 KVP03_RS01395 WP_015898719.1 296448..297221(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EISTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIATYMGKSRPYISNTIRLLQLPDVIRQAIEDGTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKTKHPPKKRNKHKTIFVKSLEKELSKSLGLPVALSLQKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=585635 KVP03_RS01395 WP_015898719.1 296448..297221(+) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAGGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATCTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTTATTGATAAAAATAAGATGACCCATGAGGACATCGCGACATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGACTGCTGCAATTACCAGACGTTATTAGACAAGCGATTGAGGACGGTACCATTAGCGCCGGC
CATGCAAGAGCTTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAGACTAAGCATCCCCCAAAAAAAAGAAACAAACATAAAACCATTTTTGTGAAGT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCCAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

62.109

99.611

0.619