Detailed information NTG0585481

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: KU515_RS00005
• Genome accession: NZ_CP077932
• Coordinates: 59..1423 (+)
• Length: 454 a.a.
• NCBI ID: WP_001085219.1
• Uniprot ID: W8U6A9
• Organism: Staphylococcus aureus strain 194
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1..6423

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KU515_RS00005 (KU515_00005)	radA	59..1423 (+)	1365	WP_001085219.1	DNA repair protein RadA	Machinery gene
KU515_RS00010 (KU515_00010)	-	1448..2521 (+)	1074	WP_001028373.1	PIN/TRAM domain-containing protein	-
KU515_RS00015 (KU515_00015)	gltX	3078..4532 (+)	1455	WP_001283786.1	glutamate--tRNA ligase	-
KU515_RS00020 (KU515_00020)	cysE	4955..5602 (+)	648	WP_001805237.1	serine O-acetyltransferase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 49835.35 Da
• Isoelectric Point: 7.0049

>NTDB_id=585481 KU515_RS00005 WP_001085219.1 59..1423(+) (radA) [Staphylococcus aureus strain 194]
MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIVEKAANPKHGVKTKELAGKVQKLNSIKHETTPRVLTDSAEFNRV
LGGGIVSGSLVLIGGDPGIGKSTLLLQICASLSQKKKVLYITGEESLSQTKLRAERLDEDSSELQVLAETDLEVIYQTVK
EEQPDLLVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEGDE
HHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVNNPSEMFLEERSTNVPGSTIVATMEGTRPLLIEVQALVTPTTFNNPR
RMATGIDHNRLSLLMAVLEKKENYLLQQQDAYIKVAGGVKLTEPAVDLSVIVATASSFKDKAVDGLDCYIGEVGLTGEVR
RVSRIEQRVQEAAKLGFKRVIIPKNNIGGWTYPEGIQVIGVTTVHEALSFALHS

Nucleotide

• Length: 1365 bp

>NTDB_id=585481 KU515_RS00005 WP_001085219.1 59..1423(+) (radA) [Staphylococcus aureus strain 194]
TTGGCCAAGAAAAAAGTGATTTTTGAATGTATGGCTTGTGGTTATCAATCTCCTAAATGGATGGGGAAATGTCCTAATTG
TGGCGCTTGGAATCAAATGGAGGAAATTGTTGAAAAAGCAGCCAATCCTAAACATGGAGTGAAAACCAAAGAATTAGCAG
GTAAAGTACAAAAATTAAATAGTATTAAACATGAAACAACGCCGAGAGTATTAACAGATTCAGCAGAATTCAACCGTGTA
TTAGGTGGAGGTATTGTGAGTGGATCGTTAGTACTTATTGGTGGGGATCCAGGAATTGGTAAGTCAACGTTACTTTTACA
AATTTGTGCATCGTTATCTCAAAAGAAAAAAGTACTATATATTACTGGAGAAGAATCGCTTAGTCAGACTAAATTACGTG
CAGAGCGATTAGATGAAGATTCAAGTGAATTGCAAGTATTAGCTGAAACAGATCTTGAAGTTATTTATCAAACAGTAAAA
GAAGAACAACCTGATTTACTAGTAGTGGATTCGATTCAAACAATATATCATCCTGAAATCAGCTCTGCGCCAGGTTCTGT
TTCACAAGTTCGTGAAAGTACACAAAGTTTAATGAATATTGCTAAACAAATGAACATTGCAACTTTTATAGTGGGTCATG
TAACGAAAGAAGGTCAAATTGCTGGCCCAAGATTGCTAGAACACATGGTTGATACTGTGCTTTATTTTGAAGGCGATGAA
CACCACGCATATCGAATTTTGCGAGCTGTTAAAAACCGTTTTGGTTCAACGAATGAAATGGGAATCTTCGAAATGAAGCA
AAGTGGATTAAAAGGTGTAAATAATCCATCTGAAATGTTTTTAGAAGAACGTTCAACAAATGTTCCAGGTTCAACAATTG
TTGCAACCATGGAGGGAACCAGACCACTTTTAATAGAAGTTCAAGCGCTGGTAACTCCAACGACTTTTAACAATCCGAGA
CGAATGGCAACAGGGATTGATCATAATCGATTAAGTTTGTTGATGGCTGTTTTGGAAAAGAAAGAAAATTATCTATTACA
ACAACAAGATGCTTATATCAAAGTAGCTGGCGGTGTAAAGTTAACGGAGCCAGCAGTTGATTTAAGTGTAATTGTAGCAA
CTGCGTCTAGCTTTAAAGATAAAGCTGTCGACGGATTAGATTGCTATATTGGAGAAGTTGGTTTAACGGGTGAGGTACGT
CGTGTATCTCGGATAGAACAACGCGTGCAAGAGGCTGCAAAACTAGGTTTCAAACGTGTAATTATTCCTAAAAATAATAT
AGGCGGATGGACATATCCTGAAGGTATACAAGTAATAGGTGTAACTACTGTACATGAAGCATTGTCATTTGCTCTTCATT
CATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (77-218)

• Subunit ChlI of Mg-chelatase (ChlI) (353-426)

3D structure

• AlphaFold DB: W8U6A9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	66.667	100	0.674
radA	Streptococcus pneumoniae Rx1	62.054	98.678	0.612
radA	Streptococcus pneumoniae D39	62.054	98.678	0.612
radA	Streptococcus pneumoniae R6	62.054	98.678	0.612
radA	Streptococcus pneumoniae TIGR4	62.054	98.678	0.612
radA	Streptococcus mitis NCTC 12261	62.054	98.678	0.612
radA	Streptococcus mitis SK321	62.054	98.678	0.612