Detailed information NTG0585322

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MYG04_RS15655
• Genome accession: NZ_CP095856
• Coordinates: 3225495..3226520 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC6563
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3220495..3231520

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYG04_RS15625 (MYG04_15625)	zapB	3220579..3220824 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
MYG04_RS15630 (MYG04_15630)	rraA	3220909..3221394 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MYG04_RS15635 (MYG04_15635)	menA	3221487..3222413 (-)	927	WP_108429951.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MYG04_RS15640 (MYG04_15640)	hslU	3222480..3223811 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
MYG04_RS15645 (MYG04_15645)	hslV	3223821..3224351 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MYG04_RS15650 (MYG04_15650)	ftsN	3224444..3225403 (-)	960	WP_000068828.1	cell division protein FtsN	-
MYG04_RS15655 (MYG04_15655)	cytR	3225495..3226520 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MYG04_RS15660 (MYG04_15660)	priA	3226676..3228874 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
MYG04_RS15665 (MYG04_15665)	rpmE	3229077..3229289 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
MYG04_RS15670 (MYG04_15670)	-	3229344..3229967 (-)	624	WP_108429952.1	TIGR02117 family protein	-
MYG04_RS15675 (MYG04_15675)	yiiX	3229974..3230582 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
MYG04_RS15680 (MYG04_15680)	metJ	3230766..3231083 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=585322 MYG04_RS15655 WP_000644904.1 3225495..3226520(-) (cytR) [Escherichia coli strain EC6563]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=585322 MYG04_RS15655 WP_000644904.1 3225495..3226520(-) (cytR) [Escherichia coli strain EC6563]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGCGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628