Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   KU534_RS02990 Genome accession   NZ_CP077923
Coordinates   585787..586503 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain 201     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 580787..591503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU534_RS02975 (KU534_02945) - 581874..582824 (+) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -
  KU534_RS02980 (KU534_02950) - 582973..584457 (+) 1485 WP_000141407.1 sucrose-6-phosphate hydrolase -
  KU534_RS02985 (KU534_02955) - 584454..585413 (+) 960 WP_001253294.1 carbohydrate kinase family protein -
  KU534_RS02990 (KU534_02960) agrA 585787..586503 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  KU534_RS02995 (KU534_02965) agrC 586522..587814 (-) 1293 WP_001825886.1 quorum-sensing sensor histidine kinase AgrC -
  KU534_RS03000 (KU534_02970) agrD 587839..587979 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  KU534_RS03005 (KU534_02975) agrB 587976..588545 (-) 570 WP_001105708.1 accessory gene regulator AgrB -
  KU534_RS13365 hld 588835..588915 (+) 81 WP_000046022.1 delta-hemolysin -
  KU534_RS03015 (KU534_02985) - 589517..590302 (-) 786 WP_000867947.1 carbon-nitrogen family hydrolase -
  KU534_RS03020 (KU534_02990) - 590610..591236 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=585233 KU534_RS02990 WP_000688492.1 585787..586503(-) (agrA) [Staphylococcus aureus strain 201]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=585233 KU534_RS02990 WP_000688492.1 585787..586503(-) (agrA) [Staphylococcus aureus strain 201]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1