Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   KU538_RS06455 Genome accession   NZ_CP077922
Coordinates   1315967..1317010 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 202     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1310967..1322010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU538_RS06425 (KU538_06385) - 1311388..1312644 (-) 1257 WP_001793428.1 aminopeptidase -
  KU538_RS06430 (KU538_06390) - 1312647..1312847 (-) 201 WP_000180460.1 DUF1128 family protein -
  KU538_RS06435 (KU538_06395) - 1312994..1313458 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  KU538_RS06440 (KU538_06400) - 1313465..1313740 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  KU538_RS06445 (KU538_06405) - 1314018..1315235 (+) 1218 WP_000037081.1 YihY/virulence factor BrkB family protein -
  KU538_RS06450 (KU538_06410) vraR 1315348..1315977 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  KU538_RS06455 (KU538_06415) vraS 1315967..1317010 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  KU538_RS06460 (KU538_06420) liaF 1317007..1317708 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  KU538_RS06465 (KU538_06425) - 1317723..1318109 (-) 387 WP_001110182.1 hypothetical protein -
  KU538_RS06470 (KU538_06430) map 1318326..1319084 (-) 759 WP_000636145.1 type I methionyl aminopeptidase -
  KU538_RS06475 (KU538_06435) - 1319558..1320544 (+) 987 WP_000999712.1 FUSC family protein -
  KU538_RS06480 (KU538_06440) - 1320733..1321146 (-) 414 WP_025174370.1 hypothetical protein -
  KU538_RS06485 (KU538_06445) - 1321175..1321285 (-) 111 WP_014937049.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=585216 KU538_RS06455 WP_001017131.1 1315967..1317010(-) (vraS) [Staphylococcus aureus strain 202]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=585216 KU538_RS06455 WP_001017131.1 1315967..1317010(-) (vraS) [Staphylococcus aureus strain 202]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTTCTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAATTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAATTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGCTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1