Detailed information NTG0585164

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MYL23_RS23025
• Genome accession: NZ_CP095830
• Coordinates: 4696125..4697150 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4691125..4702150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYL23_RS23005 (MYL23_22865)	metJ	4692310..4692627 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MYL23_RS23010 (MYL23_22870)	yiiX	4692687..4693295 (+)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
MYL23_RS23015 (MYL23_22875)	rpmE	4693356..4693568 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MYL23_RS23020 (MYL23_22880)	priA	4693771..4695969 (+)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
MYL23_RS23025 (MYL23_22885)	cytR	4696125..4697150 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MYL23_RS23030 (MYL23_22890)	ftsN	4697242..4698201 (+)	960	WP_000068818.1	cell division protein FtsN	-
MYL23_RS23035 (MYL23_22895)	hslV	4698294..4698824 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MYL23_RS23040 (MYL23_22900)	hslU	4698834..4700165 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MYL23_RS23045 (MYL23_22905)	menA	4700232..4701158 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MYL23_RS23050 (MYL23_22910)	rraA	4701251..4701736 (+)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
MYL23_RS23055 (MYL23_22915)	zapB	4701821..4702066 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=585164 MYL23_RS23025 WP_000644904.1 4696125..4697150(+) (cytR) [Escherichia coli strain EC12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=585164 MYL23_RS23025 WP_000644904.1 4696125..4697150(+) (cytR) [Escherichia coli strain EC12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628