Detailed information NTG0584934

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MYL38_RS01575
• Genome accession: NZ_CP095820
• Coordinates: 314361..315386 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Jnd12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 309361..320386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYL38_RS01545 (MYL38_01550)	zapB	309445..309690 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
MYL38_RS01550 (MYL38_01555)	rraA	309775..310260 (-)	486	WP_000872909.1	ribonuclease E activity regulator RraA	-
MYL38_RS01555 (MYL38_01560)	menA	310353..311279 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MYL38_RS01560 (MYL38_01565)	hslU	311346..312677 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MYL38_RS01565 (MYL38_01570)	hslV	312687..313217 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MYL38_RS01570 (MYL38_01575)	ftsN	313310..314269 (-)	960	WP_000068818.1	cell division protein FtsN	-
MYL38_RS01575 (MYL38_01580)	cytR	314361..315386 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MYL38_RS01580 (MYL38_01585)	priA	315542..317740 (-)	2199	WP_001318166.1	primosomal protein N'	Machinery gene
MYL38_RS01585 (MYL38_01590)	rpmE	317943..318155 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
MYL38_RS01590 (MYL38_01595)	yiiX	318216..318824 (-)	609	WP_000702299.1	YiiX family permuted papain-like enzyme	-
MYL38_RS01595 (MYL38_01600)	metJ	318884..319201 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=584934 MYL38_RS01575 WP_000644904.1 314361..315386(-) (cytR) [Escherichia coli strain Jnd12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=584934 MYL38_RS01575 WP_000644904.1 314361..315386(-) (cytR) [Escherichia coli strain Jnd12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628