Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   KU540_RS06725 Genome accession   NZ_CP077894
Coordinates   1345325..1346368 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 329     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1340325..1351368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU540_RS06695 (KU540_06655) - 1341003..1341113 (+) 111 WP_031926705.1 hypothetical protein -
  KU540_RS06700 (KU540_06660) - 1341142..1341558 (+) 417 WP_225806085.1 hypothetical protein -
  KU540_RS06705 (KU540_06665) - 1341734..1342720 (-) 987 WP_000999713.1 FUSC family protein -
  KU540_RS06710 (KU540_06670) map 1343251..1344009 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  KU540_RS06715 (KU540_06675) - 1344226..1344612 (+) 387 WP_001110184.1 hypothetical protein -
  KU540_RS06720 (KU540_06680) liaF 1344627..1345328 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  KU540_RS06725 (KU540_06685) vraS 1345325..1346368 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  KU540_RS06730 (KU540_06690) vraR 1346358..1346987 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  KU540_RS06735 (KU540_06695) - 1347100..1348317 (-) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  KU540_RS06740 (KU540_06700) - 1348595..1348870 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  KU540_RS06745 (KU540_06705) - 1348877..1349341 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  KU540_RS06750 (KU540_06710) - 1349488..1349688 (+) 201 WP_000180460.1 DUF1128 family protein -
  KU540_RS06755 (KU540_06715) - 1349691..1350947 (+) 1257 WP_001793983.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=584687 KU540_RS06725 WP_001017131.1 1345325..1346368(+) (vraS) [Staphylococcus aureus strain 329]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=584687 KU540_RS06725 WP_001017131.1 1345325..1346368(+) (vraS) [Staphylococcus aureus strain 329]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAGTTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGATCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1