Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   KU500_RS11580 Genome accession   NZ_CP077867
Coordinates   2391887..2392603 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain 367     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2386887..2397603
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU500_RS11560 (KU500_11525) - 2387981..2388931 (+) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -
  KU500_RS11565 (KU500_11530) - 2389080..2390564 (+) 1485 WP_000141422.1 sucrose-6-phosphate hydrolase -
  KU500_RS11570 (KU500_11535) - 2390561..2391520 (+) 960 WP_001253300.1 carbohydrate kinase family protein -
  KU500_RS11575 (KU500_11540) - 2391708..2391815 (-) 108 WP_031844951.1 hypothetical protein -
  KU500_RS11580 (KU500_11545) agrA 2391887..2392603 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  KU500_RS11585 (KU500_11550) agrC 2392622..2393914 (-) 1293 WP_031844950.1 quorum-sensing sensor histidine kinase AgrC -
  KU500_RS11590 (KU500_11555) agrD 2393939..2394079 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  KU500_RS11595 (KU500_11560) agrB 2394076..2394645 (-) 570 WP_001105712.1 accessory gene regulator AgrB -
  KU500_RS13820 hld 2394935..2395015 (+) 81 WP_000046023.1 delta-hemolysin -
  KU500_RS11605 (KU500_11570) - 2395614..2396399 (-) 786 WP_000867953.1 carbon-nitrogen family hydrolase -
  KU500_RS11610 (KU500_11575) - 2396760..2397386 (-) 627 WP_000522383.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=584245 KU500_RS11580 WP_000688492.1 2391887..2392603(-) (agrA) [Staphylococcus aureus strain 367]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=584245 KU500_RS11580 WP_000688492.1 2391887..2392603(-) (agrA) [Staphylococcus aureus strain 367]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGATCCA
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACGTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1