Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   KU524_RS10710 Genome accession   NZ_CP077863
Coordinates   2235186..2235902 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain 371     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2230186..2240902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU524_RS10690 (KU524_10660) - 2231280..2232230 (+) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -
  KU524_RS10695 (KU524_10665) - 2232379..2233863 (+) 1485 WP_000141422.1 sucrose-6-phosphate hydrolase -
  KU524_RS10700 (KU524_10670) - 2233860..2234819 (+) 960 WP_001253300.1 carbohydrate kinase family protein -
  KU524_RS10705 (KU524_10675) - 2235007..2235114 (-) 108 WP_031844951.1 hypothetical protein -
  KU524_RS10710 (KU524_10680) agrA 2235186..2235902 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  KU524_RS10715 (KU524_10685) agrC 2235921..2237213 (-) 1293 WP_031844950.1 quorum-sensing sensor histidine kinase AgrC -
  KU524_RS10720 (KU524_10690) agrD 2237238..2237378 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  KU524_RS10725 (KU524_10695) agrB 2237375..2237944 (-) 570 WP_001105712.1 accessory gene regulator AgrB -
  KU524_RS13815 hld 2238234..2238314 (+) 81 WP_000046023.1 delta-hemolysin -
  KU524_RS10735 (KU524_10705) - 2238913..2239698 (-) 786 WP_000867953.1 carbon-nitrogen family hydrolase -
  KU524_RS10740 (KU524_10710) - 2240059..2240685 (-) 627 WP_000522383.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=584152 KU524_RS10710 WP_000688492.1 2235186..2235902(-) (agrA) [Staphylococcus aureus strain 371]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=584152 KU524_RS10710 WP_000688492.1 2235186..2235902(-) (agrA) [Staphylococcus aureus strain 371]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGATCCA
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACGTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1