Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   KU543_RS12890 Genome accession   NZ_CP077858
Coordinates   2624128..2624844 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain AC6     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2619128..2629844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU543_RS12870 (KU543_12810) - 2620220..2621170 (+) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -
  KU543_RS12875 (KU543_12815) - 2621319..2622803 (+) 1485 WP_000141432.1 sucrose-6-phosphate hydrolase -
  KU543_RS12880 (KU543_12820) - 2622800..2623759 (+) 960 WP_001253312.1 carbohydrate kinase family protein -
  KU543_RS12885 (KU543_12825) - 2623947..2624056 (-) 110 Protein_2490 hypothetical protein -
  KU543_RS12890 (KU543_12830) agrA 2624128..2624844 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  KU543_RS12895 (KU543_12835) agrC 2624863..2626146 (-) 1284 WP_000447888.1 quorum-sensing sensor histidine kinase AgrC -
  KU543_RS12900 (KU543_12840) agrD 2626176..2626319 (-) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  KU543_RS12905 (KU543_12845) - 2626322..2626885 (-) 564 WP_001105696.1 accessory gene regulator AgrB -
  KU543_RS13770 hld 2627175..2627255 (+) 81 WP_000046022.1 delta-hemolysin -
  KU543_RS12915 (KU543_12855) - 2627855..2628640 (-) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  KU543_RS12920 (KU543_12860) - 2629001..2629627 (-) 627 WP_000522381.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=584000 KU543_RS12890 WP_000688492.1 2624128..2624844(-) (agrA) [Staphylococcus aureus strain AC6]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=584000 KU543_RS12890 WP_000688492.1 2624128..2624844(-) (agrA) [Staphylococcus aureus strain AC6]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1