Detailed information NTG0583980

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW399_RS03415
• Genome accession: NZ_CP095540
• Coordinates: 730307..731332 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain GN03204
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 725307..736332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW399_RS03395 (MW399_03395)	metJ	726492..726809 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MW399_RS03400 (MW399_03400)	yiiX	726869..727477 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
MW399_RS03405 (MW399_03405)	rpmE	727538..727750 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MW399_RS03410 (MW399_03410)	priA	727953..730151 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
MW399_RS03415 (MW399_03415)	cytR	730307..731332 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
MW399_RS03420 (MW399_03420)	ftsN	731424..732383 (+)	960	WP_000068834.1	cell division protein FtsN	-
MW399_RS03425 (MW399_03425)	hslV	732476..733006 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW399_RS03430 (MW399_03430)	hslU	733016..734347 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW399_RS03435 (MW399_03435)	menA	734414..735340 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW399_RS03440 (MW399_03440)	rraA	735433..735918 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MW399_RS03445 (MW399_03445)	zapB	736003..736248 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=583980 MW399_RS03415 WP_000644908.1 730307..731332(+) (cytR) [Escherichia coli strain GN03204]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583980 MW399_RS03415 WP_000644908.1 730307..731332(+) (cytR) [Escherichia coli strain GN03204]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625