Detailed information NTG0583965

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MW396_RS24750
• Genome accession: NZ_CP095538
• Coordinates: 5072638..5073621 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain GN04592
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 5067638..5078621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW396_RS24735 (MW396_24730)	dppA	5068938..5070545 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
MW396_RS24740 (MW396_24735)	dppB	5070696..5071715 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
MW396_RS24745 (MW396_24740)	dppC	5071725..5072627 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MW396_RS24750 (MW396_24745)	amiE	5072638..5073621 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
MW396_RS24755 (MW396_24750)	dppF	5073618..5074622 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MW396_RS24760 (MW396_24755)	yhjV	5074652..5075923 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
MW396_RS24765 (MW396_24760)	-	5076399..5076506 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW396_RS24770 (MW396_24765)	-	5076882..5076989 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=583965 MW396_RS24750 WP_001196486.1 5072638..5073621(+) (amiE) [Escherichia coli strain GN04592]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=583965 MW396_RS24750 WP_001196486.1 5072638..5073621(+) (amiE) [Escherichia coli strain GN04592]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404