Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   B1NLA3E_RS05255 Genome accession   NC_021171
Coordinates   1073882..1075705 (+) Length   607 a.a.
NCBI ID   WP_015592803.1    Uniprot ID   N0AXI7
Organism   Bacillus sp. 1NLA3E     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1068882..1080705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B1NLA3E_RS05235 (B1NLA3E_04810) spxA 1069431..1069826 (+) 396 WP_015592799.1 transcriptional regulator SpxA -
  B1NLA3E_RS05240 (B1NLA3E_04815) mecA 1070147..1070815 (+) 669 WP_015592800.1 adaptor protein MecA Regulator
  B1NLA3E_RS05245 (B1NLA3E_04820) cls 1070917..1072428 (+) 1512 WP_015592801.1 cardiolipin synthase -
  B1NLA3E_RS05250 (B1NLA3E_04825) - 1072555..1073751 (+) 1197 WP_015592802.1 competence protein CoiA family protein -
  B1NLA3E_RS05255 (B1NLA3E_04830) pepF 1073882..1075705 (+) 1824 WP_015592803.1 oligoendopeptidase F Regulator
  B1NLA3E_RS25175 - 1076264..1076437 (-) 174 WP_041580928.1 hypothetical protein -
  B1NLA3E_RS24660 - 1076508..1076789 (-) 282 WP_144061429.1 hypothetical protein -
  B1NLA3E_RS05265 (B1NLA3E_04840) - 1076786..1077667 (-) 882 WP_015592805.1 ClpXP adapter SpxH family protein -
  B1NLA3E_RS05270 (B1NLA3E_04845) - 1077664..1078071 (-) 408 WP_015592806.1 globin -
  B1NLA3E_RS05275 (B1NLA3E_04850) - 1078283..1078861 (-) 579 WP_015592807.1 CYTH domain-containing protein -
  B1NLA3E_RS05280 (B1NLA3E_04855) - 1079091..1079732 (+) 642 WP_015592808.1 GTP pyrophosphokinase family protein -
  B1NLA3E_RS05285 (B1NLA3E_04860) - 1079771..1080565 (+) 795 WP_015592809.1 NAD kinase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 70100.81 Da        Isoelectric Point: 4.8481

>NTDB_id=58390 B1NLA3E_RS05255 WP_015592803.1 1073882..1075705(+) (pepF) [Bacillus sp. 1NLA3E]
MEQDTKVTKLPARSEIAIDDTWKLEDIFTSDEEWEKEFQEVKGLIPGVKEFAGKLHESAEQLYKALSLQDQLLQRLGKLY
AYSHMRYDQDTTNSFYQGLDDRMKNLYSQAGSALAYIVPEILSIDEKTVKGFLEEKPELKLYEHALEEINLQRPHILSAD
QEALLAEAGEVLDSSSTTFGVLNNADIEFPSIKDENGEEVEVTHGRYSRFLESEDRRVRQDAFKAVYKTYGDFQNTFAST
LSGTVKKDNFNARVHKYESARHAALSANNIPESVYENLVETIHEYLPLLHRYIKLRKEALGLDELHMYDLYTPLVKNVKM
EISYNEAKDLILKGLAPLGEEYLNVLKEGFENRWVDVHENKGKRSGAYSSGAYGTNPYILMNWQDNVNNLFTLVHEFGHS
VHSYYTRKTQPYPYGSYSIFVAEVASTCNEALLNEFLIKTTEDEQKRLYLLNHYLEGFRGTVFRQTMFAEFEHLIHQKAQ
NNEPLTPDLLTKEYYQLNKKYYGEENIVIDEEIGLEWARIPHFYYNYYVYQYATGFSAATALSKQILEEGEPAVTRYLDF
LKSGSSDYPIEVLKKAGVDMTSKTPIAEACKVFEEKLTEMENLLLKR

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=58390 B1NLA3E_RS05255 WP_015592803.1 1073882..1075705(+) (pepF) [Bacillus sp. 1NLA3E]
ATGGAACAAGACACAAAGGTAACCAAACTACCTGCACGAAGTGAAATCGCGATTGATGATACCTGGAAGTTAGAGGACAT
TTTTACATCCGATGAGGAATGGGAAAAAGAGTTTCAAGAGGTAAAGGGTCTGATTCCAGGTGTTAAGGAATTTGCTGGAA
AACTTCATGAAAGTGCTGAACAATTATATAAGGCGCTATCGTTACAAGACCAATTATTACAACGCTTAGGCAAATTATAT
GCCTATTCTCACATGCGCTATGATCAAGATACAACAAATTCCTTTTATCAGGGTCTAGATGATCGCATGAAAAATCTATA
TTCTCAGGCAGGAAGTGCACTAGCCTATATTGTTCCGGAAATTTTATCAATTGATGAAAAGACGGTGAAGGGTTTTTTAG
AGGAAAAGCCAGAGTTAAAACTGTATGAACATGCTTTAGAAGAAATCAATCTTCAGCGTCCCCATATTCTTTCAGCAGAT
CAAGAAGCGCTATTAGCTGAAGCAGGGGAAGTGTTAGACTCCTCTAGTACAACTTTTGGTGTCTTAAATAATGCGGATAT
CGAATTCCCTAGTATTAAGGATGAAAATGGCGAAGAGGTAGAAGTCACTCATGGACGTTACAGTCGTTTCCTTGAAAGCG
AGGACCGTCGTGTTCGCCAGGATGCTTTTAAAGCTGTGTACAAAACATATGGGGATTTCCAAAATACATTTGCTAGTACA
CTTAGTGGTACAGTGAAAAAGGATAATTTTAACGCAAGAGTGCACAAGTATGAATCAGCACGACATGCAGCGCTTTCTGC
TAATAACATTCCAGAATCAGTATATGAAAACCTAGTTGAGACGATCCATGAATATTTGCCATTGTTACATCGCTATATTA
AGCTTCGTAAGGAAGCCTTGGGATTAGACGAGCTGCATATGTATGATTTGTATACGCCACTTGTGAAAAATGTGAAAATG
GAAATTAGTTATAATGAGGCTAAGGATCTGATTTTAAAAGGGTTGGCACCATTAGGTGAAGAATATCTGAATGTTTTAAA
AGAAGGTTTTGAGAATCGTTGGGTCGATGTCCATGAGAATAAAGGGAAACGCAGTGGCGCCTATTCTTCTGGTGCCTATG
GAACAAATCCTTATATTTTAATGAACTGGCAAGATAATGTGAACAATCTATTTACACTTGTCCACGAGTTTGGTCATTCT
GTTCATAGTTATTATACAAGGAAAACTCAACCATATCCTTATGGTAGTTATTCTATTTTCGTGGCGGAGGTTGCCTCGAC
CTGTAATGAAGCATTGTTGAATGAATTTTTAATAAAAACAACAGAAGATGAGCAAAAACGCCTATATCTTCTCAATCATT
ATTTGGAAGGGTTCAGGGGAACTGTTTTCCGTCAAACGATGTTTGCTGAATTTGAGCATTTGATTCATCAAAAGGCTCAG
AATAACGAGCCGTTAACACCCGATCTGTTAACAAAAGAATATTATCAATTAAATAAAAAATATTATGGTGAAGAAAATAT
CGTAATTGATGAAGAAATCGGCTTAGAGTGGGCAAGGATTCCACATTTTTATTACAACTATTATGTTTACCAATATGCTA
CTGGTTTCAGTGCGGCAACTGCTTTGAGTAAACAAATTCTTGAAGAGGGCGAACCAGCTGTCACTCGTTATCTGGATTTT
CTAAAGTCAGGTAGCTCTGATTACCCGATTGAGGTATTGAAAAAGGCCGGTGTTGATATGACAAGTAAAACACCAATTGC
CGAAGCATGCAAAGTATTTGAAGAAAAGTTGACAGAGATGGAAAATTTATTGTTAAAACGCTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-591)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N0AXI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

51.104

97.035

0.496

Multiple sequence alignment