Detailed information NTG0583725

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW397_RS00900
• Genome accession: NZ_CP095529
• Coordinates: 181913..182938 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GN06156
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 176913..187938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW397_RS00875 (MW397_00875)	rraA	177327..177812 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MW397_RS00880 (MW397_00880)	menA	177905..178831 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW397_RS00885 (MW397_00885)	hslU	178898..180229 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW397_RS00890 (MW397_00890)	hslV	180239..180769 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW397_RS00895 (MW397_00895)	ftsN	180862..181821 (-)	960	WP_000068844.1	cell division protein FtsN	-
MW397_RS00900 (MW397_00900)	cytR	181913..182938 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MW397_RS00905 (MW397_00905)	priA	183094..185292 (-)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
MW397_RS00910 (MW397_00910)	rpmE	185495..185707 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
MW397_RS00915 (MW397_00915)	yiiX	185768..186376 (-)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
MW397_RS00920 (MW397_00920)	metJ	186436..186753 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=583725 MW397_RS00900 WP_000644904.1 181913..182938(-) (cytR) [Escherichia coli strain GN06156]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583725 MW397_RS00900 WP_000644904.1 181913..182938(-) (cytR) [Escherichia coli strain GN06156]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628