Detailed information NTG0583701

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MW395_RS21935
• Genome accession: NZ_CP095526
• Coordinates: 4350290..4351273 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain GN05505
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4345290..4356273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW395_RS21920 (MW395_21915)	dppA	4346590..4348197 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
MW395_RS21925 (MW395_21920)	dppB	4348348..4349367 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
MW395_RS21930 (MW395_21925)	dppC	4349377..4350279 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MW395_RS21935 (MW395_21930)	amiE	4350290..4351273 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
MW395_RS21940 (MW395_21935)	dppF	4351270..4352274 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MW395_RS21945 (MW395_21940)	yhjV	4352304..4353575 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
MW395_RS21950 (MW395_21945)	-	4354051..4354158 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW395_RS21955 (MW395_21950)	-	4354534..4354641 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=583701 MW395_RS21935 WP_001196486.1 4350290..4351273(+) (amiE) [Escherichia coli strain GN05505]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=583701 MW395_RS21935 WP_001196486.1 4350290..4351273(+) (amiE) [Escherichia coli strain GN05505]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404