Detailed information NTG0583687

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW395_RS19880
• Genome accession: NZ_CP095526
• Coordinates: 3908836..3909861 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GN05505
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3903836..3914861

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW395_RS19860 (MW395_19855)	metJ	3905021..3905338 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MW395_RS19865 (MW395_19860)	yiiX	3905398..3906006 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
MW395_RS19870 (MW395_19865)	rpmE	3906067..3906279 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MW395_RS19875 (MW395_19870)	priA	3906482..3908680 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
MW395_RS19880 (MW395_19875)	cytR	3908836..3909861 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MW395_RS19885 (MW395_19880)	ftsN	3909953..3910912 (+)	960	WP_000068844.1	cell division protein FtsN	-
MW395_RS19890 (MW395_19885)	hslV	3911005..3911535 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW395_RS19895 (MW395_19890)	hslU	3911545..3912876 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW395_RS19900 (MW395_19895)	menA	3912943..3913869 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW395_RS19905 (MW395_19900)	rraA	3913962..3914447 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=583687 MW395_RS19880 WP_000644904.1 3908836..3909861(+) (cytR) [Escherichia coli strain GN05505]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583687 MW395_RS19880 WP_000644904.1 3908836..3909861(+) (cytR) [Escherichia coli strain GN05505]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628