Detailed information NTG0583633

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW404_RS23465
• Genome accession: NZ_CP095520
• Coordinates: 4757222..4758247 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain GN04171
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4752222..4763247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW404_RS23435 (MW404_23445)	zapB	4752306..4752551 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
MW404_RS23440 (MW404_23450)	rraA	4752636..4753121 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MW404_RS23445 (MW404_23455)	menA	4753214..4754140 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW404_RS23450 (MW404_23460)	hslU	4754207..4755538 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW404_RS23455 (MW404_23465)	hslV	4755548..4756078 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW404_RS23460 (MW404_23470)	ftsN	4756171..4757130 (-)	960	WP_000068834.1	cell division protein FtsN	-
MW404_RS23465 (MW404_23475)	cytR	4757222..4758247 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
MW404_RS23470 (MW404_23480)	priA	4758403..4760601 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
MW404_RS23475 (MW404_23485)	rpmE	4760804..4761016 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
MW404_RS23480 (MW404_23490)	yiiX	4761077..4761685 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
MW404_RS23485 (MW404_23495)	metJ	4761745..4762062 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=583633 MW404_RS23465 WP_000644908.1 4757222..4758247(-) (cytR) [Escherichia coli strain GN04171]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583633 MW404_RS23465 WP_000644908.1 4757222..4758247(-) (cytR) [Escherichia coli strain GN04171]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625