Detailed information NTG0583618

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MW404_RS21140
• Genome accession: NZ_CP095520
• Coordinates: 4289324..4290307 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain GN04171
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4284324..4295307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW404_RS21115 (MW404_21130)	-	4285473..4285580 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW404_RS21120 (MW404_21135)	-	4285956..4286063 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW404_RS21125 (MW404_21140)	-	4286439..4286546 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW404_RS21130 (MW404_21145)	yhjV	4287022..4288293 (+)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
MW404_RS21135 (MW404_21150)	dppF	4288323..4289327 (-)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MW404_RS21140 (MW404_21155)	amiE	4289324..4290307 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
MW404_RS21145 (MW404_21160)	dppC	4290318..4291220 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MW404_RS21150 (MW404_21165)	dppB	4291230..4292249 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
MW404_RS21155 (MW404_21170)	dppA	4292556..4294163 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=583618 MW404_RS21140 WP_001196477.1 4289324..4290307(-) (amiE) [Escherichia coli strain GN04171]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=583618 MW404_RS21140 WP_001196477.1 4289324..4290307(-) (amiE) [Escherichia coli strain GN04171]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404