Detailed information NTG0583498

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MW405_RS09140
• Genome accession: NZ_CP095518
• Coordinates: 1955984..1956967 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain GN02350
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1950984..1961967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW405_RS09115 (MW405_09115)	bcsF	1951145..1951336 (+)	192	WP_000988311.1	cellulose biosynthesis protein BcsF	-
MW405_RS09120 (MW405_09120)	bcsG	1951333..1953012 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MW405_RS09125 (MW405_09125)	ldrD	1953099..1953206 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW405_RS09130 (MW405_09130)	yhjV	1953682..1954953 (+)	1272	WP_001467807.1	amino acid permease	-
MW405_RS09135 (MW405_09135)	dppF	1954983..1955987 (-)	1005	WP_000103583.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MW405_RS09140 (MW405_09140)	amiE	1955984..1956967 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
MW405_RS09145 (MW405_09145)	dppC	1956978..1957880 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MW405_RS09150 (MW405_09150)	dppB	1957890..1958909 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
MW405_RS09155 (MW405_09155)	dppA	1959060..1960667 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=583498 MW405_RS09140 WP_001196477.1 1955984..1956967(-) (amiE) [Escherichia coli strain GN02350]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=583498 MW405_RS09140 WP_001196477.1 1955984..1956967(-) (amiE) [Escherichia coli strain GN02350]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTCAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404