Detailed information NTG0583496

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW405_RS08995
• Genome accession: NZ_CP095518
• Coordinates: 1917372..1918397 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain GN02350
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1912372..1923397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW405_RS08975 (MW405_08975)	metJ	1913557..1913874 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MW405_RS08980 (MW405_08980)	yiiX	1913934..1914542 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
MW405_RS08985 (MW405_08985)	rpmE	1914603..1914815 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MW405_RS08990 (MW405_08990)	priA	1915018..1917216 (+)	2199	WP_001468126.1	primosomal protein N'	Machinery gene
MW405_RS08995 (MW405_08995)	cytR	1917372..1918397 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
MW405_RS09000 (MW405_09000)	ftsN	1918489..1919448 (+)	960	WP_000068834.1	cell division protein FtsN	-
MW405_RS09005 (MW405_09005)	hslV	1919541..1920071 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW405_RS09010 (MW405_09010)	hslU	1920081..1921412 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW405_RS09015 (MW405_09015)	menA	1921479..1922405 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW405_RS09020 (MW405_09020)	rraA	1922498..1922983 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=583496 MW405_RS08995 WP_000644911.1 1917372..1918397(+) (cytR) [Escherichia coli strain GN02350]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583496 MW405_RS08995 WP_000644911.1 1917372..1918397(+) (cytR) [Escherichia coli strain GN02350]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATCGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625