Detailed information NTG0583462

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MW403_RS23360
• Genome accession: NZ_CP095514
• Coordinates: 4880834..4881817 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain GN02323
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4875834..4886817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW403_RS23340 (MW403_23365)	-	4877466..4877573 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW403_RS23345 (MW403_23370)	-	4877949..4878056 (-)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
MW403_RS23350 (MW403_23375)	yhjV	4878532..4879803 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
MW403_RS23355 (MW403_23380)	dppF	4879833..4880837 (-)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MW403_RS23360 (MW403_23385)	amiE	4880834..4881817 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
MW403_RS23365 (MW403_23390)	dppC	4881828..4882730 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MW403_RS23370 (MW403_23395)	dppB	4882740..4883759 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
MW403_RS23375 (MW403_23400)	-	4883777..4884004 (+)	228	WP_000198577.1	hypothetical protein	-
MW403_RS23380 (MW403_23405)	dppA	4884066..4885673 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=583462 MW403_RS23360 WP_001196477.1 4880834..4881817(-) (amiE) [Escherichia coli strain GN02323]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=583462 MW403_RS23360 WP_001196477.1 4880834..4881817(-) (amiE) [Escherichia coli strain GN02323]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404