Detailed information NTG0583392

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MW403_RS01360
• Genome accession: NZ_CP095514
• Coordinates: 280573..281598 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain GN02323
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 275573..286598

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MW403_RS01330 (MW403_01330)	zapB	275657..275902 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
MW403_RS01335 (MW403_01335)	rraA	275987..276472 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MW403_RS01340 (MW403_01340)	menA	276565..277491 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MW403_RS01345 (MW403_01345)	hslU	277558..278889 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MW403_RS01350 (MW403_01350)	hslV	278899..279429 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MW403_RS01355 (MW403_01355)	ftsN	279522..280481 (-)	960	WP_000068846.1	cell division protein FtsN	-
MW403_RS01360 (MW403_01360)	cytR	280573..281598 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
MW403_RS01365 (MW403_01365)	priA	281754..283952 (-)	2199	WP_001305041.1	primosomal protein N'	Machinery gene
MW403_RS01370 (MW403_01370)	rpmE	284155..284367 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
MW403_RS01375 (MW403_01375)	yiiX	284428..285036 (-)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
MW403_RS01380 (MW403_01380)	metJ	285096..285413 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=583392 MW403_RS01360 WP_000644904.1 280573..281598(-) (cytR) [Escherichia coli strain GN02323]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=583392 MW403_RS01360 WP_000644904.1 280573..281598(-) (cytR) [Escherichia coli strain GN02323]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628